Rahnella bonaserana: QNM34_02320
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Entry
QNM34_02320 CDS
T09076
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbon03016
]
QNM34_02320 (truB)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QNM34_02320 (truB)
Transfer RNA biogenesis [BR:
rbon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QNM34_02320 (truB)
Prokaryotic type
QNM34_02320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WHZ41165
LinkDB
All DBs
Position
505486..506430
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKSLGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPLCLG
EATKFSRFLLDSDKRYRVIARMGQRTDTSDAEGSIICEREMAFTQQQLDDALDSFRGETQ
QIPSMYSALKYEGKKLYEYARQGIEVPRESRSITVYELKFIRWEGFEVELEIHCSKGTYI
RTIVDDLGEKLGCGAHVTYLRRLQVATYPSERMVTMEQLHELIAQAEEQGIEPRLLLDPL
LLPMDSACEDFPEVNLLPVVAGYVKQGQPVQASGAPVSGMVRITEGEERKFIGVGEIDDD
GRIAPRRLVVEYTD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcccacgtcgccgcggccgtgatatacacggtgttctgctattagacaaatct
ttaggcttgtcttctaacgatgccctgcaaaaggttaaacgcctttataacgctaaccgg
gcaggacataccggcgcgctcgatcctttagctactggcatgttgccgctgtgcttaggc
gaagcgaccaagttttcccggttcttgctcgattctgacaaacgttatcgcgtgattgcc
cgtatgggacaacgcacggacacgtcagatgctgaaggctccatcatttgtgaacgtgaa
atggccttcactcagcagcaacttgacgatgctctcgacagtttccgcggggaaacccag
caaattccttccatgtattctgcattgaaatatgaaggaaaaaaactgtacgagtacgcg
cgtcagggcatcgaagttccgcgagaatcccgcagcattaccgtgtatgaactcaagttc
atccgctgggaaggcttcgaggttgaattagaaatccactgttccaaaggcacttacatc
cgcacgattgtggatgatctgggcgaaaaattgggctgtggtgcgcacgtcacatatttg
cgtcgtctgcaggttgcaacctatccttcagagcgtatggttaccatggaacaacttcat
gagctgatcgctcaggcagaagaacagggcattgagccacgcctgctgctggatccattg
ttgttgccgatggacagcgcgtgtgaagacttcccggaagtgaatctgctgccagtggtg
gccggatatgtcaaacagggtcaacctgttcaggcatctggtgcgccggtcagtggcatg
gttcgcatcaccgaaggcgaagaacgtaagtttatcggtgtaggcgaaattgatgatgat
ggccgcattgcgccgcgtcgtctggtcgtcgaatacacggattaa
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