Rahnella bonaserana: QNM34_02330
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Entry
QNM34_02330 CDS
T09076
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNM34_02330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbon03019
]
QNM34_02330 (pnp)
03016 Transfer RNA biogenesis [BR:
rbon03016
]
QNM34_02330 (pnp)
Enzymes [BR:
rbon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QNM34_02330 (pnp)
Messenger RNA biogenesis [BR:
rbon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNM34_02330 (pnp)
Transfer RNA biogenesis [BR:
rbon03016
]
Prokaryotic type
tRNA degradation factors
QNM34_02330 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WHZ41167
LinkDB
All DBs
Position
507096..509219
Genome browser
AA seq
707 aa
AA seq
DB search
MLNPTIRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSL
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELKTSRLDLVVA
GTQGAVLMVESEAEVLSEDQMLGAVVFGHEQQQIVIDNINSLVAEAGKPKWDWQPEVVNA
ELHARVAALSESRLGDAYLITEKQERYNQINVIKSDVVQALQAEDETLDAGEISDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGESFIVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPSQDETTEQPAAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgactattcgtaaattccaatacggccagcacaccgttacgctggaaacc
ggcatgatggctcgtcaggcaactgccgctgttatggtcagcatggacgacaccgcggta
ttcgttaccgttgttggccagaaaaaagctaaaccaggtcagagcttcttcccgctgact
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggacgtccaagtgaaggcgaaactctgacttcacgtctgattgaccgtccgattcgt
cctctgttcccggactccttcctgaatgaagttcaggttatcgcgactgtagtttccctg
aacccacaagttaaccctgacatcgttgcgatgatcggtgcgtctgcagcccttagcctg
tctggtattccattcaatggcccaattggtgctgcacgcgttggttacatcaacgaccag
tatgttctgaacccaaccgcagatgagctgaaaacaagccgtctggacctggttgttgcc
ggtactcagggcgcggttctgatggttgaatctgaagctgaagtgttgagcgaagatcag
atgctgggcgcggtcgtattcggccacgaacaacaacaaatcgttatcgacaacatcaac
tcactggttgctgaagccggtaagccaaaatgggactggcagccagaagtggttaacgct
gagctgcacgctcgcgtagctgcactgtctgaatcccgtctgggtgatgcgtacctgatc
accgagaaacaagagcgttacaaccagattaacgtcatcaaatctgacgttgttcaggct
ctgcaagctgaagacgaaactctggacgctggcgaaatctctgacattctgggcagcatt
gagaagaacgtggttcgtagccgtgttctgcgtggcgagccacgtatcgatggccgcgaa
aaagacatgatccgtggtctggatgtgcgtactggtgttctgccgcgtactcacggttct
gcactgttcactcgtggtgaaactcaggcactggttactgcaactctgggtactgcccgt
gatgcacagaaccttgatgagctgatgggcgagaaaactgacagcttcctgttccactac
aacttccctccgtactctgttggtgagaccggtatggtaggttcgccaaaacgtcgtgag
attggccatggccgtcttgctaaacgtggcgtactggcgatgatgccaaaaccagaagac
ttcccgtacaccgtacgtgtggtttctgaaatcactgaatctaacggttcatcttcaatg
gcttctgtttgtggcgcatctctggccctgatggatgcaggcgtgccaattaaagccgct
gttgcgggtatcgcaatgggtctggttaaagaaggcgaaagctttatcgttctgtccgac
attctgggtgacgaagatcatctgggcgacatggactttaaagtagccggtagccgcgac
ggtatcaccgcgctgcagatggacattaaaatcgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcacattctgggcgtgatggaacaggct
atcagcacaccacgtggcgatatctcgcagtttgctccacgtattcacaccatcaagatc
agcccggacaaaatcaaggacgtgatcggtaaaggtggttctgtaatccgtgcgctgact
gaagaaaccggcaccaccatcgaaatcgaagatgacggtactgtgaaaatcgcagcaacc
gacggcgagaaagcgaaatacgctatccgtcgtatcgaagagatcactgctgaaatcgaa
gttggccgtatctatcagggtaaagtgacccgtatcgtagactttggtgcgtttgttgcc
atcggcggcggtaaagaaggtctggtacacatttctcaaatcgctgacaagcgtgtagag
aaagtgactgattacctgcagatgggtcaggaagtaccggttaaggttctcgaagttgac
cgtcagggtcgtgtgcgtctgagcatcaaagaagctaccgcaccttctcaggacgaaaca
actgagcaacctgcagcagaataa
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