Rahnella bonaserana: QNM34_04495
Help
Entry
QNM34_04495 CDS
T09076
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00310
Lysine degradation
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
QNM34_04495
Enzymes [BR:
rbon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
QNM34_04495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WHZ41556
LinkDB
All DBs
Position
991504..993651
Genome browser
AA seq
715 aa
AA seq
DB search
MNIIAIMRPEGAYYKEEPIRELDSALTLLGFQIIYPRDRADLLKLIENNARICGAIFDWD
QHSEELCTEINELNEYLPLYAFINTHSTLDVDVNEMRMVLYFFEYALSAADDIAKRVRQY
TDEYIDTITPPLTKALFNYVEEGKYTFCTPGHMAGTAFLKSPVGTLFYDFFGAKTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGSEQSYIVTNGTSTANKIVGMYAAPAGSTVLI
DRNCHKSLAHLMMMTNIVPVYLRPNRNAYGILGGIPQHEFTRESIEEKIAQTENASWPVH
AVITNSTYDGLLYNTDYIKNTLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIY
ETQSTHKLLAAFSQASMIHIKGDYNESTFNEAYMMHTTTSPNYGIVASAETAAAMLRGNP
GRRLINRSVERALHFRKEIQRLREETDGWFFDIWQPEHIDEAECWPLNPDQNWHGFANAD
TDHMYLDPIKVTILTPGMNEMGKLEEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTKSMSLMRGLTDFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRH
DLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDDLIGKVSANMILPYPPGVPVVM
PGEMITEESRAVLDFLIMLCSIGERYPGFETDIHGTRLTEDGRYLVKVLKLPEAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatcgctatcatgcgcccggaaggggcttactacaaagaggagccaatccgc
gaactggatagcgcactgacgcttcttgggtttcagataatttatccgcgtgaccgcgct
gacttactcaaactcatcgaaaacaatgcccggatctgtggtgcgattttcgactgggat
cagcacagcgaagagctgtgtaccgaaattaacgaacttaatgaatacctgccgctttat
gctttcatcaatacgcattcgacactggacgttgacgtcaatgaaatgcgtatggtgttg
tatttctttgagtatgcgttgagtgcggccgatgatattgctaaacgcgtccgacagtac
accgatgaatatattgatacgattacgccgccgctgacaaaagcgttattcaattatgtg
gaagaagggaaatacaccttctgtacaccagggcatatggccggtacggcttttttgaaa
agtccggttggaacactattctatgattttttcggcgctaaaacgctgaaagcggatgtg
tcgatttcggtaactgagttgggttctttgctcgatcacaccggcccgcatcttgaggcc
gaagaatatatcgcgcgaacgtttggctctgaacagagctatatcgttaccaatggtacc
tcgacggcgaacaaaattgtcggcatgtatgcagcacctgcaggaagcacagtgctgatt
gaccgcaactgtcataaatcactcgcgcatctgatgatgatgactaatatcgtgccggtc
tatttgcgcccgaaccgtaatgcttacggcattcttggcggcatcccgcagcatgaattc
acccgtgaaagcatcgaagagaaaattgcccagaccgagaatgcctcctggccggttcac
gcggtcataaccaattccacttacgatggtctgttgtacaacaccgattacatcaagaat
acgctggatgttccgtcgattcatttcgattctgcatgggtcccgtacaccaacttccat
ccgatttatgatggcaaaagcggaatgagcggggagaggatcccggggaaagtcatctac
gaaacgcaatcaacacacaagttactggcggctttctcgcaggcttcaatgattcacatt
aagggtgattacaacgaaagcacctttaacgaagcttacatgatgcacaccacaacctcg
ccaaactacggcattgtcgcctcggcggaaacggcagcggcgatgttgcgcgggaacccc
ggacgacgtctgatcaaccgctcagtggaacgtgccctgcattttcgtaaagagatccaa
aggcttcgcgaagagactgacggctggttctttgatatctggcagcccgaacatattgat
gaagcggaatgctggccgctgaatccggatcaaaactggcacggttttgccaacgccgat
accgatcatatgtatctggatccgatcaaagtgaccatcctgacacccggcatgaatgaa
atgggtaagctggaagaggaggggatcccggcggcgttagtggcgaaattcctggatgag
cgcggcgtggtggtggaaaaaaccggtccgtacaatctgcttttcctgttcagtatcggc
attgataaaaccaaatctatgagcctgatgcgcgggctgaccgatttcaaacgcagttat
gatctcaatttgcgggtcaagaatatgctgccagatctctatgcggaagatcctgatttc
tatcgcaacatgcgtattcaggatctggcgcaggggatccacaagctgatcgtccgccac
gacttgccgcgattaatgctggaagcattcgatgtattgccggaaatgaaaatgacgccg
tacgaaatgttccagcatcaggttcgcggacatatagatgaatgtgatatcgatgatctg
atcggcaaagtatccgccaacatgatactgccttatccgccgggcgtgccggtagtgatg
ccgggagaaatgatcaccgaagaaagccgcgcggtgctcgatttcctgattatgttgtgc
tcgataggtgaacgttatcctggctttgaaaccgatattcatggaacgcgtctcacagaa
gacggacgctatctggtgaaagtcttaaaacttccggaagcggagtaa
DBGET
integrated database retrieval system
