Rahnella bonaserana: QNM34_05105
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Entry
QNM34_05105 CDS
T09076
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNM34_05105 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_05105 (recC)
Enzymes [BR:
rbon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QNM34_05105 (recC)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNM34_05105 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF4129
Motif
Other DBs
NCBI-ProteinID:
WHZ41666
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All DBs
Position
1118113..1121574
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AA seq
1153 aa
AA seq
DB search
MNSGLMVLHGNHSEALRDVLVSWMAAHPLSPLENEVILVQSNGINQWLKLALARDVAEGG
CGIAAALDIKLPARFFWQVYRAVLGKEQVPESSPFDRPLLTWRLIRLLPELLAEPVFAPL
ARFLKDDGDMRKLHQLSQRLADLFDQYQVYRADWLEDWGNGLDVLRTSRTGSEPLPENLL
WQPQLWRALLADVPENERNTSRAALHQRFLQHAQTLPEDQRPAGLPARLVVFGISSLPQQ
SLEVLAVLGRWTHIFMCVHNPCEHDWSDIIADKDLLRAERKRQLRKPGMPQVIADDELHQ
HAHPLLAAWGKQGRDYIGLLNEYDNHESYASQLAPVIPRIDLFTSNGTDTLLHQLQEDIL
QLRPLAETIDEWPPADVQHDDSLRFYITHSAQREVEVLHDRLLAALAADPTLKARDIIVM
VPDINGYAPHIQAVFGLTERSDPRYIPFTVADQGPRQNNSLLGALESLLELPQSRFAVSD
LLDLLDVPSVRQRFGIEEEQLPLLHRWIRAANVRWGLHAEQRQSLELPLSPEQNSWFFGL
QRMLLGYAVGSGEAWENIEPLDEIGGLDAALIGPLSHLLNCLDDTWRQLREPAAPQVWGE
RLRTILSQYFAEDDGEDGFILVRLHGELETWLEACESVDLQAELPLSVVRDHWLAQFDQS
GLTQPFFGGAVTFATLMPMRAIPFRHVYLLGMNDGDYPRNRVPMDFDLMGRDYRPGDRSR
REDDRYLFLEALLSARERLHISWVGRSIHDNTERPPSVLVAQLRDHLAAGWKAENGEDLL
HALTVEHRLQPFNRDYFSRESSLFSYAHEWRAGLEAEAASVATQPLQPVEQEGALTLRQL
SDFLSDPVRSFFRQRLNIYFELEDPGSEDQEPFDINALENWRLQDELIRAQKWALEAGVS
RQDVLREQLERIERRGELAPGEFAAVLSEDLAEPMDTLFASYQQVLYDWPQPLANEALES
ETGGVMFSDWLSELRANAAGDRARVVLESIGIMTKERSYRFDRLLPYWVAHIAGHLDGKP
MNTVIVSKNGTAELPPLEIAFARNLWETLIETWKAGQLRPLPLAVKTAFVWLKKEGTEQS
APDSDAWFAARDSYENHDPANMKFGERDSNAYLARAWPDFASLWSDGEFARLAETLLAPL
RNHLSRSKKGAKE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcaggtttgatggtattacacggaaatcactcagaagcgctgagggacgtgctg
gtctcgtggatggcggcgcatccgctgtcgccgctggaaaacgaagtgattctggtgcag
agcaacggcattaatcagtggctgaaactggcgctggcgcgtgatgtggctgaaggcggt
tgcggcattgcggcggcgctggatatcaaattaccggcacgctttttctggcaggtttac
cgtgcggtgctcggtaaagaacaggtgccggaatcatcgccgttcgaccgtccgctgctg
acctggcgcctgatccgcctgttgcccgaactgcttgccgaaccggtgtttgcgccgctg
gcccgtttcttaaaagatgacggcgatatgcgcaagctgcatcagctctcacagcggctg
gcggatttattcgatcagtatcaggtttatcgcgccgactggctggaagactggggcaac
gggctggatgttctgcgcaccagccgcacaggcagcgagccgttgccggaaaacctgctg
tggcagccgcaactgtggcgggcactgctggcggatgtgcctgaaaacgagcgcaacacc
agccgtgcggcgctgcatcagcggttcctgcaacacgcgcaaacccttcctgaagatcag
cgtccggccggattacccgcgcggctggtggtgtttggcatctcctcgttaccgcaacaa
tctctcgaagtgctggcggtactggggcgctggacacacatctttatgtgcgtgcataac
ccgtgcgagcatgactggagcgatatcatcgccgataaagatctgctgcgtgcggaacgc
aaacgccagttgcgtaagccgggcatgccgcaggtgattgccgacgatgaactccatcag
catgcccatccgctgctggcggcgtggggcaagcagggccgcgattatattggtctgctc
aatgaatatgacaaccacgaatcctatgcctcgcagctcgcaccggtgatcccgcgcatc
gatctctttacgtcgaacggcactgataccctgttgcatcagctgcaggaagatattttg
cagctgcgtccgctggctgaaacgatcgatgaatggcctccggcagatgttcagcacgac
gattccctgcgtttctacattacccacagcgctcagcgtgaagtggaagtgctgcatgac
cgcctgctggcggcgctggcggctgacccgacgctgaaagcccgcgatatcatcgtgatg
gtgccggatatcaacggttatgcgccgcacattcaggcggtatttggcctgacagagcgc
agcgatccgcgctatatcccgttcacggttgccgatcaggggccgcgccagaacaactca
ttactcggcgcgctggaaagcctgctggaactgccgcagtcgcgttttgcggtcagtgat
ttgctggatttactcgacgtaccgtcggtgcgtcagcgcttcgggattgaggaagaacaa
ctgccgctgctgcaccgctggatccgcgccgccaacgtgcgctgggggctgcatgcggaa
cagcgtcagagcctcgagctgccattatcgccggaacaaaacagctggttctttggcctg
caacgtatgctgctgggttacgcggtgggcagcggcgaagcctgggaaaacatcgagccg
ctggatgaaatcggcgggctggatgcggcgctgatcggtccgctgtcgcatctgctgaac
tgccttgatgacacctggcgtcagttgcgggaacctgccgcaccgcaggtatggggcgag
cgcctgcgcactattctttcccaatactttgccgaagatgacggcgaggacggctttatt
ttagtgcgtctgcacggcgaactggaaacctggctggaagcctgcgaaagcgtcgatctg
caggctgaactgccgttgtcggtggtgcgcgatcactggctggcgcagttcgaccagtca
ggcctgacacaaccgtttttcggcggcgcggtgacgttcgccacgctgatgccaatgcgt
gccattcctttccgccacgtctatctgctgggtatgaacgacggcgattatccgcgtaac
cgcgtgccgatggatttcgatctgatggggcgcgattaccgccccggcgaccgttcgcgt
cgtgaagatgaccgctatctgttcctcgaagcgctgctttcagcgcgtgaacgcttacat
atcagctgggtggggcgcagcattcatgacaacactgagcgtcctccgtccgtgctggtg
gcacagttacgcgaccatctggcggcaggctggaaagccgaaaacggtgaagatttgctg
catgcgctgaccgtagagcatcgcctgcaacccttcaaccgtgactatttcagtcgggaa
agttcgctgttcagctatgcccacgaatggcgcgccggactggaagcggaagctgcgtcc
gtggccacacaaccgctgcaaccggtcgaacaggaaggcgcgctgacgctgcgtcagttg
tcggattttctgtcggatccggtgcgcagtttcttccgtcagcggctgaatatctatttc
gagctggaagatcccggcagtgaagatcaggaaccgttcgatattaatgcgctggaaaac
tggcgtttgcaggatgaactgatccgcgcgcaaaaatgggcgctggaagcgggcgtttcg
cgtcaggatgttttacgtgagcaactcgaacgcattgagcggcgcggcgagctggcaccg
ggcgaatttgcggcggtactgagtgaagatctggctgagccgatggacaccttatttgcc
agttatcagcaggtactctatgactggccgcaaccgctggcaaatgaggcgctggagtct
gaaaccggcggcgtgatgttctctgactggctgagtgaactgcgcgcaaatgcggcgggc
gaccgtgcgcgcgtggtgctggaaagtatcggcatcatgacgaaggaacgcagttaccgc
ttcgaccggctgctgccttactgggtcgcgcatatcgcaggacatcttgacggaaagccg
atgaacacagtgattgtcagtaaaaacggcacggctgaattgccgccccttgagatagct
tttgcacgcaatttgtgggaaacgctgattgaaacgtggaaagcggggcaactgcggccg
ttgccgctggcagtgaaaaccgcctttgtctggctgaaaaaagagggcacggagcagagt
gcgccggacagtgacgcctggtttgccgcccgcgacagttatgaaaatcatgatccggcg
aacatgaaatttggtgagcgtgacagcaacgcgtatctggcccgcgcgtggccggatttc
gcctcactctggtcagacggtgaatttgcccgtctcgccgaaaccctgctggcaccgctg
agaaatcacctgtcacgcagcaaaaaaggagcgaaggaatga
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