Rahnella bonaserana: QNM34_05115
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Entry
QNM34_05115 CDS
T09076
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNM34_05115 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_05115 (recD)
Enzymes [BR:
rbon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QNM34_05115 (recD)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNM34_05115 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
AAA_28
PhoH
SLFN-g3_helicase
Mg_chelatase
nSTAND3
T2SSE
AAA_5
NTPase_1
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WHZ41668
LinkDB
All DBs
Position
1125284..1127335
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AA seq
683 aa
AA seq
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MKINSREEIARLLASWVECGWLRELDRALVTFLAKEAPDAHPLLLLATALTSYQLGRGHV
CLDLQATLDDSAFSLSLPPEGDHADGAVIRPAAVLDDLSLQEWMAALAHPTLVGHGEGNS
PLVLNGQRLYLRRYWQYEQNVRAAIEQRLTRSALHTLPAESLQAPLTALFPTADSATADW
QKLACALAAGNAFSIITGGPGTGKTTTVVRLLALLQTLALEETGQPLRIRLAAPTGKAAA
RLNESIAGAVSKLDLSGLGNGDAVRESINTEVVTLHRLLGSRPDTRHFRHHQGNPLMLDV
LVVDEASMVDLEMMAALLAALPDRARLILLGDKDQLASVEAGALLSELCQRAKGGHYLPQ
TRDWLQSATGEQIPDTLVDPQGSAMDQAVVMLRHSYRFDAQSGIGQLAEAVNDGDVNALK
QVWKHGYADLAQLTLRADDDSELRNWVVKGCAAQFPAASKREGTEPPVGYQHYLNVMIQE
RPADDEPPEAFNRWATKVLLAYSQFQLLCALRGGRWGVEGLNLRIAEILYKEGLLEASVG
WYPGRPVLVTRNDYSQRLMNGDIGITLEIPHRLADGSVVPVLRVAFLAGDGTQDIRWVMP
GRLQAVETVFAMTVHKSQGSEFTHTALLLPENLSPILTRELIYTGITRARHWFSLGCVGG
VNAVLPQAVQRRVLRASGLIEGA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaacagccgtgaagagattgcccgactgctggcgagctgggtggaatgtggc
tggctgcgtgaactggatcgcgccctggtgacgtttctggcgaaagaagcgccggacgca
catccgttattattgctggcgaccgcactgaccagctatcagctggggcgcggtcatgtg
tgtctggatttgcaggccacgctcgacgacagtgcattttcactctcgctgccaccggaa
ggggatcacgctgacggcgcggtgatccgcccggcggcggtgctggatgacctgagtttg
caggaatggatggcggcgctggcgcacccgaccctggtcgggcacggtgaggggaattct
ccgctggtgctgaacgggcagcgtctgtatctgcgccggtactggcagtacgaacagaat
gtgcgcgcggcgattgaacagcgtctgacccgcagtgccctgcatacattaccggctgaa
tccctgcaggcaccgctgacggcattattcccgacggcggattctgccaccgccgactgg
cagaaactggcctgtgcgctggcggcgggcaatgcgttcagcattattaccggcggaccg
ggcaccgggaaaaccacgacggtggtgcgtctgctggcgctgttgcaaacgctggcgctg
gaagaaaccggccagccgctgcgtatccggctggctgccccgacgggtaaggcagcggcg
cgtctgaatgagtcgatagccggtgcggtatctaaactggatctcagcgggctcggtaac
ggtgatgcggtgcgtgagagcattaatactgaagtggtcacgctgcaccgtttgctgggc
agccgccccgatacccgccatttcaggcatcatcagggaaatccactgatgctggatgtg
ctggtggtggacgaagcgtcaatggttgacctggaaatgatggcggcgcttcttgccgcg
ttgccagaccgcgcgcgtctgatcctgctgggtgataaagatcagctggcgtcggtagaa
gcgggcgcattgctcagtgagttatgtcagcgtgcgaagggcggtcattatctgccgcaa
acccgcgactggctgcagagtgcgaccggtgagcaaatcccggatacgctggtagatccg
caagggtcagcgatggatcaggcggtggtcatgctgcgtcacagttaccgttttgatgca
caaagcggcatcggtcagctggcggaagcggtcaacgacggtgatgttaatgcgctgaaa
caggtctggaaacacggatatgccgatctcgcgcaactgacattacgcgctgacgatgac
agcgaattgcgcaactgggtagtgaaggggtgcgcagcacagtttcctgcggcgtcaaaa
cgcgaaggcaccgagcctcctgtcggttatcagcattatctcaacgtaatgattcaggag
cggcctgcggacgacgaaccgccggaagccttcaaccgctgggcgaccaaagtgctgctg
gcttacagccagttccagttgctgtgcgccttacgtggcgggcgctggggcgtggaagga
ctcaatctgcgcattgctgaaattttgtataaagaaggcttgctggaggcgtcagtcggc
tggtatccgggacgtccggtactggtgacccgtaacgattacagccagcgcctgatgaat
ggcgacatcggcatcacactggaaatcccgcaccggctggccgacggttcggtggtgccg
gtgctgcgggtggcgtttctggccggggacggtacgcaggatatccgctgggtaatgccg
ggacgtttgcaggcggtggaaacggtgtttgctatgacagtgcataaatcccagggatcg
gaatttacccataccgcgctgctgctgccggagaatctgagcccgattttaacccgcgag
ctgatctataccggcatcacacgcgcgcgtcactggttcagtctgggatgtgtcggaggc
gtgaatgcggtattgccgcaagccgtgcagcggcgcgtgttacgtgccagcggattaatt
gaaggcgcgtaa
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