Rahnella bonaserana: QNM34_05200
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Entry
QNM34_05200 CDS
T09076
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00550
Peptidoglycan biosynthesis
rbon01100
Metabolic pathways
rbon01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QNM34_05200 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QNM34_05200 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbon01011
]
QNM34_05200 (mrdA)
Enzymes [BR:
rbon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QNM34_05200 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbon01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QNM34_05200 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WHZ41684
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All DBs
Position
1140724..1142670
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AA seq
648 aa
AA seq
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MALLNDEIRDHTAESVLFVRRAVIAFLVVILLSSALVFNLYHLQVGMHDFYQTRSNQNDI
KMLPIAPSRGLIMDRNGVVLAQNITLYQIEVIPGKVPDLNATLNALKPIVDLTQDDLDSF
HDAMIHGRRFAQIPLKLALTDVEVARFSVNQFDFPGVSISTYQQRRYPYGAELAHVVGYV
SKINDKDAKRLDAEGISENYAADHDIGKQGVEKYYESILHGRTGYQEVEVDNHGHVVRLL
KEVPPQAGQNIYLTLDLGLQQYIEKVLKGQRAAVVVMDPRDGGIKAMVSSPSYDPNPFVN
GISTKQYSALLKNPDLPLINRVTQGLYPPASTVKPFMATSALFEGVITPQTTFFGAPTWT
LPGTERHYRDWLKTGHGMLNVTKAIEESADTFFYQVAYEMGIDRIHTWLSKFGYGQSSGI
DLDEQYNGVLPSREWKMKVHKKGWYQGDTVSVGIGQGYWVATPIQMVRALSALVNNGKLE
TPHLLYSAKSGKVITPYKMPPTQQIADPKSPVWGIVKNGMFGMANFPNGTGYKLFHTAPY
QIAAKSGTSQVFSLRENQVYNAKMTPVRLRDHIFYTAFAPYKHPTVVMALIMENGGGDGV
VAGPTARAILDHIFLPPQATMCDPAKADNPADCEQPVPTPNSLGFSEH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccctacttaacgacgaaattcgcgaccataccgccgagtccgtccttttcgttcgt
cgtgccgtgattgcatttttggtcgtgatcctgctgtcttctgcgctggtgtttaatctg
taccatctgcaggtgggtatgcacgatttttaccaaacccgctccaatcagaatgacatc
aaaatgctgccgatcgccccgagccgcgggctgattatggatcgcaacggcgtggtgctg
gcgcaaaatattaccctctatcagattgaagtgatcccgggcaaagtgccggatcttaac
gccacgctgaatgcactgaaaccgattgtcgatctcacacaagacgatctggacagtttc
cacgacgccatgatccacggccgtcgttttgcacagataccgctgaagctggcgctgacc
gatgtggaagtcgcgcgtttttccgtgaaccagtttgatttccctggcgtttctatcagt
acgtatcagcagcgtcgttatccttatggcgcggagctggcgcacgtggtcggctacgtg
tctaaaattaacgataaagatgccaaacgtcttgatgccgaagggatttcggagaattac
gccgctgaccacgatatcggcaagcagggcgttgaaaagtattatgaaagtatcctgcat
ggccgtaccggttatcaggaagtcgaagtggataaccacggccacgtggtgcgcctgctc
aaagaggttccgccgcaggccggacaaaatatctacctgacgctggatctggggttgcag
cagtacatcgagaaagtcctgaaaggtcagcgtgcggcggtggtagtgatggatccccgg
gacggcggcattaaagccatggtctccagcccgagctatgatccgaatccgtttgtgaac
ggcatttctactaagcaatacagtgcgttactgaaaaaccctgacctgccgctgattaac
cgtgttacgcagggcctttatccaccggcctctacggtcaaaccttttatggccacgtcg
gcgttgtttgaaggggtgatcacaccgcaaaccaccttctttggtgcgccgacctggacg
ctgccgggcaccgaacgccactaccgcgactggcttaaaaccggccacggtatgctgaac
gtgaccaaagcgattgaggagtctgccgatacgttcttctatcaggtggcctatgaaatg
ggcatcgatcgtattcatacctggctgagtaaatttggctacgggcagtcgagcgggata
gatctcgacgagcaatataatggcgtgctgccaagccgtgaatggaaaatgaaagtccat
aaaaaaggctggtaccagggggataccgtttctgtcggtatcgggcagggctattgggtc
gcgacgccaattcagatggtgcgtgcgctcagtgcgctggtgaataatggtaagctggaa
accccccatctgctttattcagcgaaaagcggcaaagtaattacgccatataaaatgcca
ccgacgcagcaaatagcggatccgaaatcccctgtctggggaattgtgaaaaacggcatg
tttggcatggcaaatttcccgaatggtaccggctataaattattccacacggcgccttat
cagattgcggcaaaatccggtacatcgcaggttttcagcctgcgtgagaatcaggtttat
aacgctaaaatgacgccggttcgcttgcgtgaccacatcttctacacggcgtttgcgcct
tacaaacatccgacggtagtgatggcgctgatcatggaaaatggcggcggtgacggcgtg
gtggccggaccgaccgcgcgcgccatactcgaccatattttcctgccaccgcaggcgacc
atgtgcgatccggccaaagcggataatccggctgactgcgaacaacccgttccgacacct
aattcgctgggctttagtgagcattaa
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