Rahnella bonaserana: QNM34_06195
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Entry
QNM34_06195 CDS
T09076
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00071
Fatty acid degradation
rbon00280
Valine, leucine and isoleucine degradation
rbon00310
Lysine degradation
rbon00362
Benzoate degradation
rbon00380
Tryptophan metabolism
rbon00410
beta-Alanine metabolism
rbon00640
Propanoate metabolism
rbon00650
Butanoate metabolism
rbon00907
Pinene, camphor and geraniol degradation
rbon00930
Caprolactam degradation
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01120
Microbial metabolism in diverse environments
rbon01200
Carbon metabolism
rbon01212
Fatty acid metabolism
Module
rbon_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QNM34_06195 (fadJ)
00650 Butanoate metabolism
QNM34_06195 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
QNM34_06195 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QNM34_06195 (fadJ)
00310 Lysine degradation
QNM34_06195 (fadJ)
00380 Tryptophan metabolism
QNM34_06195 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QNM34_06195 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QNM34_06195 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QNM34_06195 (fadJ)
00930 Caprolactam degradation
QNM34_06195 (fadJ)
Enzymes [BR:
rbon01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QNM34_06195 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QNM34_06195 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QNM34_06195 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Cathelicidins
Motif
Other DBs
NCBI-ProteinID:
WHZ41863
LinkDB
All DBs
Position
1346979..1349180
Genome browser
AA seq
733 aa
AA seq
DB search
MRDNMENPNIPEITPAETVSAFSLMFTAEHVGIITIDVPGEKVNTLKAEFAQQICAILQK
AQQYPSLKGLVLVSGKPDSFIAGADITMISGCKTAAEASNLAQKGQTVMSQIASFPVPVV
AAIHGACLGGGLELALACHARVCSLDDKTQLGLPEVQLGLLPGSGGTQRLPRLIGAPKAL
DMMLTGRSIRAKQALRMGLVDDAVPYSILLQTALERVAKGRKSRPPLPWQARLAGGPLGK
SVLFHFVRKQTRAKTHGNYPATEKIIDVVKTGLDQGSGNGYQAEAKAFGELVMTPESAAL
RGLFFASTALKKEKGGDAEPLPVRRVGILGGGLMGGGIANVTAIKAGLPVRIKDINQEGI
RHALKYSWDLLEKKVRSRRLTRNEQQRQMMLISGTTDYSGFAQIDIVVEAVFEDLSLKQS
MVADIENNAAPRTIFASNTSSLPIHKIAEQASRPEQVIGLHYFSPVDKMPLVEVIPHAGT
SAQTISTTVSLAKKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLAGEPVDHIDKALVN
FGFPVGPIQLLDEVGIDVGTKIGPILVEAFGERFAAPSGFDAVLKDDRKGRKNGKGFYLY
GQKGRAAKKKQVDPAIYRLLNVTPKAQQSEEEIAQRCVMLMLNEAVRCLDEQVIRSARDG
DLGAVFGIGFPPFRGGPFRYIDTLGVTNVVKTLQQLAQRYGEHFLPCEGLVRRAEQGEPC
FLTDGANGKVSKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagggacaatatggaaaacccaaacattccggaaatcaccccggcagaaacggtttct
gctttttcgctgatgtttaccgcggagcacgtggggattatcaccatcgacgttcccggc
gaaaaggtgaataccttaaaggctgaattcgctcaacaaatttgcgccattttgcaaaaa
gcccagcaataccccagccttaaaggcctggtgctggtttccggcaaacccgactctttt
atcgcgggtgcggatatcaccatgatatcgggctgcaagacggcggcagaggcaagcaat
ctggcgcaaaaaggtcagactgtcatgtcgcagattgcttcgtttccggtgcctgtcgtt
gcggccatccacggtgcctgtctgggcggcggtcttgagctggcgctggcgtgccatgcg
cgcgtctgttccctcgatgataaaacccagctcggcctgccggaggttcagcttggcctg
ctgccaggatccggcggtacgcagcgtcttccacgtttaatcggcgcgccgaaagcactg
gatatgatgttaaccggtcgcagcattcgcgcgaaacaggcgctgagaatggggctggtg
gatgacgccgtgccttactctattttgctgcaaactgcgctggagcgtgtggctaaaggg
cgtaagtcgcgtccgccattgccgtggcaggcgcggctggccggtggcccgttgggtaaa
agtgtgctgtttcattttgtgcgcaaacagacccgtgccaaaacgcacggtaattacccg
gcgaccgaaaaaattattgatgtggtgaaaaccggtctcgatcagggcagcggcaacggc
tatcaggctgaagcgaaagcctttggcgaactggtcatgacgccggaatccgcggcatta
cgcggcctgttcttcgcatccaccgcactgaaaaaagaaaagggcggcgatgccgaacct
ttaccggtgcgtcgcgtcggcattctgggcggcgggctgatgggcggtggtatcgccaac
gtgactgccatcaaagccggactgccggtacgcatcaaagatataaatcaggaaggcatc
cgtcatgcgctgaaatacagctgggatttgctggagaaaaaggtgcgcagccgcaggctc
acccgtaacgaacagcaacgccagatgatgctgatttccggcaccaccgattacagcggt
tttgcgcagattgatatcgtggtggaagcggtctttgaagatttatccctcaagcagtcg
atggtggcggatattgaaaataacgccgctccgcgcacgatattcgcttcaaacacgtct
tcactgcctatccataagattgcagagcaggccagccggcctgaacaggtgatcggcctg
cactatttcagtccggtagataaaatgccgctggttgaagtgataccccatgcaggaacc
agtgcgcagacgatttcgaccacagtttcactggcgaagaaacaagggaaaacagcgatt
gtggtcggtgacagcgccgggttctatgtaaaccgcattctggcgccgtacatcaatgaa
gctgcccgctgtctgctggcgggcgaacctgtcgatcacatcgataaagcgctggtgaat
ttcggattcccggtcggcccgatacagttgctggatgaagtgggtattgatgtgggcacc
aaaatcggtccgattctggtggaggcatttggtgagcgttttgctgcgccatcgggtttt
gatgcagtgctgaaagacgaccgcaaagggcgtaagaacggcaaaggtttctatttgtac
gggcaaaaaggccgggcggcgaagaagaaacaggtcgatcctgccatttaccggctgctg
aatgtcacaccgaaagcgcagcagtcagaagaagagatcgcgcagcgctgcgtgatgctg
atgctcaacgaagcggtacgttgtctggatgagcaggttatccgcagtgcgcgggatggt
gatctgggtgcggtgttcggcattggtttcccgccattccgtggtggaccgttccgttac
atcgacacactcggtgtcacgaacgttgtgaaaacccttcaacagctggcacaacgctat
ggcgagcatttcctgccatgcgaagggctggtgcgcagggcggagcagggcgagccttgt
tttttgacagacggcgcaaacggaaaggtcagcaaagtgtga
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