Rahnella bonaserana: QNM34_07545
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Entry
QNM34_07545 CDS
T09076
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
QNM34_07545 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbon02000
]
QNM34_07545 (msbA)
Enzymes [BR:
rbon01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
QNM34_07545 (msbA)
Transporters [BR:
rbon02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
QNM34_07545 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
AAA_22
ABC_membrane_2
DEAD
AAA_16
nSTAND3
APS_kinase
AAA_30
MMR_HSR1
AAA_29
Cytidylate_kin
AAA_25
DUF87
SLFN-g3_helicase
AAA_18
AAA_15
AAA_23
AAA_5
DUF3169
Motif
Other DBs
NCBI-ProteinID:
WHZ42121
LinkDB
All DBs
Position
1683020..1684768
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AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPMITPFKAGLIAAAIALVANAASDTFMLSLLKPLLDDGFGKAD
RSILLWMPLVVIGLMVVRGISGYISSYCISWVSGKVVMHMRRRLFGHMMRMPVAFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFVMMFYYSWQLSVILLVIAPIVSV
VIRVVSKRFRNISKTMQNTMGQVTTSAEQMLKGHKEVLIFGGQKVETARFDKVSNRMRQQ
GMRMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLSAGTITVVFSSMIALMRPLKS
LTNVNSQFQRGMAACQTLFSILDMEQEKDEGKLEVKRVKGDVEFKNVTFTYPGRDIPALR
NISFELPEGKTVALVGRSGSGKSTIANLLTRFYDIQEGKILMDGHDLREYTLSSLRDQVA
LVSQNVHLFNDTIANNIAYARTDMYSREEIEKAATMAYAMDFISKMDKGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEILVIEDGCIVERGSHAKLLEERGVYSQLYRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgataaagatctctccacatggcagacattccgccgcttgtggccgatgatc
acaccttttaaagccgggcttatcgctgcggctattgcgctggtcgctaacgccgccagt
gatactttcatgctgtctttgctgaagccactgctggatgacggttttggtaaagctgac
cgctcaattcttctctggatgccactggtcgttatcggtctgatggtcgttcgtggtatc
agtggctacatttccagctactgcatttcctgggtgtcgggcaaagtagtgatgcatatg
cgtcgccgtctgttcggtcatatgatgagaatgccggtcgctttctttgaccagcaatct
accggtaccttgctttcgcgcattacctacgattcagaacaggtggcgtcatcgtcttcc
agtgcgctggtgaccgtggtacgtgagggtgcgtcgatcattggtctgtttgtcatgatg
ttctactacagctggcaactgtcggtgatcctcttagtgattgcgccgattgtttctgtt
gttattcgtgtggtgtctaaacgcttccgtaatatcagtaagacaatgcaaaacaccatg
gggcaggtgacaaccagcgctgagcaaatgctgaaaggccataaagaagtattgatcttc
ggtggtcagaaagtggaaaccgcgcgttttgataaagtcagtaaccgcatgcgtcagcaa
ggtatgcgtatggtttctgcttcttcaatctccgacccgattatccagctgattgcttct
ctggctctggctttcgtcttgtatgcggcgagcttcccgtctgtaatggaaaccctcagc
gcgggtactattacagtcgttttctcttccatgattgccctgatgcgtccgctgaaatca
ctgactaacgttaactctcagttccagcgcggtatggctgcctgtcagactctgttctcc
attctggatatggaacaggaaaaagacgaaggcaaactggaagttaagcgcgttaaaggt
gacgtggaattcaaaaatgtgactttcacctatcctggtcgtgatattccggcactgcgt
aatatttccttcgagctgccagaagggaaaaccgttgcactggtgggacgttccggttcc
ggtaaatcgaccatcgcgaatttactgacacgcttctatgacattcaggaaggtaaaatc
ctgatggatgggcatgatttgcgtgaatacaccctgtcgtcattgcgcgatcaagtggcg
ctggtttcccagaacgtccatttattcaacgacaccattgctaacaatatcgcttacgcc
cgaactgatatgtactcccgcgaagaaatcgaaaaagcggccactatggcgtatgcgatg
gactttatcagcaaaatggacaaagggctggataccgtcattggcgaaaatggcgttctg
ctttcaggtggtcagcgtcagcgtattgccattgctcgtgccttgttacgtgactcgcca
gttctgatcctcgatgaagcaacctctgcgctggatactgagtctgagcgcgcaattcag
gctgcgctggatgaattgcagaaaaaccgcacctcactggttatcgctcaccgtttatcg
actatcgaaaaagcggatgaaatcctggtcattgaggatggttgtatcgttgaacggggc
tcgcacgcgaaacttctggaagagcgcggcgtttactcacaactctaccggatgcaattc
gggcaatga
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