KEGG   Rahnella bonaserana: QNM34_08020
Entry
QNM34_08020       CDS       T09076                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
rbon  Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:rbon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbon03400]
    QNM34_08020 (helD)
Enzymes [BR:rbon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QNM34_08020 (helD)
DNA repair and recombination proteins [BR:rbon03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QNM34_08020 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 DEAD AAA_11
Other DBs
NCBI-ProteinID: WHZ42213
LinkDB
Position
1777561..1779615
AA seq 684 aa
MELKSTSFGKHLAQHPYNRVRLLNAGVEVSGDKHHYLIPFNQLIQIRCKRGIVWGELEFE
LPEQKVVRLHGTEWQETQRFYQYLLNIWQTWSQEMSGVSAGVLHGQIEKITQIEQQDKWF
KRADLADVQKDIQEAFSAVPVPVERLNDFDNCRDDYQTCLRWLEQGKRSVTQRNLAWTER
VIADNRDFFDTVEVSPLNESQCRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRQEAL
PEQILLLAFGRQAADEMNTRIKERLHTDGIKAKTFHALALQIIQEGSKKAPKISKLETDA
KARRSLLIKTWQQQCAEKKVQASGWRQWMTDELEWTVPDGDYWKNKSLAERLGSRLERWL
SLMRMHGGSQAEMIESAPEEVKDLFTKRIRLMAPLMKAWKTALKDEGAVDFSGLIHQAVN
ILEKGRFVSPWKHILVDEFQDISPQRALLLSALRKLNKHTSLFAVGDDWQAIYRFSGAEL
SLTTAFATNFGEGAQCALDTTYRFNDRIGEIANKFVQQNPHQLKKPLNSLTKGNKKNVVI
LPDEQMEKLLDKLSGYVTADERILVLARYHHLRPQILEKAATRWPKLNLEFMTIHASKGQ
QAEYVIIVGLHEGNDGFPAAARESLLEEVLLPEPEDFMDAEERRLLYVAMTRAKHQVWLM
QDKERPSVFVEQLEDIGVPVQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaattgaaatcgacctcattcgggaaacatctggcgcagcatccatacaaccgggtg
cgtctgcttaatgcgggcgttgaagtcagtggcgataaacatcactacctgatccctttt
aatcagcttatccagatccgctgtaagcgcggcatcgtatggggtgagctggagtttgaa
ttaccagaacaaaaagtcgtgcgcctgcatggcaccgaatggcaggaaactcagcggttt
tatcagtacctcctcaatatctggcagacctggagtcaggaaatgagcggggttagcgcg
ggggtattgcacgggcaaatcgaaaaaatcactcagattgagcagcaggataaatggttc
aaacgggctgatttagccgatgtacaaaaagatattcaggaagccttttctgcggtgccg
gtgcccgtcgaacgccttaatgattttgacaattgccgtgatgattaccagacctgcctg
cgctggctggagcaggggaagcgcagcgtgacgcaacgtaatctggcctggaccgaaagg
gttattgcggacaatcgcgattttttcgataccgttgaggtttcgccgctcaacgaaagt
cagtgtcgtgccgtggtcaatggtgaggattccgttctggttctggccggtgccggtagc
ggtaaaacatcggtgctggtggcccgtgctggctggttgttaaggcgccaggaggcgctt
cctgaacaaattctcctgctggccttcgggcgtcaggctgcggatgaaatgaatacccgt
atcaaagaacggctgcacactgacggaatcaaagccaaaaccttccatgcgctggcgtta
caaattattcaggaagggagcaaaaaagcgccgaagataagcaaactcgaaaccgatgct
aaagcacgtcgctcactgctgattaaaacctggcagcaacagtgtgctgagaaaaaagta
caggccagcggctggcggcagtggatgaccgacgagctggaatggacggttcctgacggt
gattactggaaaaataaatcgctggcagaacgactgggtagccgcctcgaacgctggctt
agtctgatgcgtatgcacggtggcagtcaggcagaaatgattgaaagcgcgccggaagaa
gtgaaagacctgttcacgaaacgcattcgtctgatggcgccgctgatgaaagcctggaaa
actgcgctcaaagatgagggcgcggtagatttctctgggctcatccatcaggcggttaac
attctggaaaaaggccgtttcgtcagtccctggaaacatattctggtcgatgaatttcag
gatatttcgccacagcgcgcgttgctgctttcggcattacgcaagctcaacaaacacacc
agtttatttgcggtcggggatgactggcaggcgatttaccgtttcagtggtgccgaactt
tcgctcacgaccgcctttgccacaaactttggtgaaggggcacaatgcgcgctggatacg
acataccgcttcaatgatcgtatcggtgaaattgccaataaatttgtccagcaaaacccg
catcagttgaaaaaaccgctgaacagtctgactaaaggtaataaaaagaatgtcgtcatc
ctgcccgacgaacagatggaaaaattgctggataagctcagcgggtatgtcactgccgac
gagcggattctggtactggcgcgttatcaccatctgcgtccgcaaattctggagaaggcc
gcaacacgctggccaaaactcaatcttgaattcatgaccattcacgccagcaaagggcaa
caggcagaatatgtgattatcgtcggactgcatgaggggaacgatggtttccctgctgcg
gcgcgggagtctcttctggaagaagttctgcttccggagccggaggatttcatggatgcc
gaggagcggcgtttattgtatgtggccatgacgcgggcaaaacatcaggtctggctgatg
caggataaagagcgtccgtcggtatttgtggaacagctggaagacatcggcgttccggtt
cagcgcaaaccctaa

DBGET integrated database retrieval system