Rahnella bonaserana: QNM34_10420
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Entry
QNM34_10420 CDS
T09076
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00040
Pentose and glucuronate interconversions
rbon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QNM34_10420
Enzymes [BR:
rbon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
QNM34_10420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
WHZ42642
LinkDB
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Position
2303868..2306036
Genome browser
AA seq
722 aa
AA seq
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MRASKFVIAALSLGMGAQSIAAALPDASKLVWHSITFGQSTDVNFATNVLPQKIGMNETR
LADGKPVPAAGTLLSTPFTLESRGGKVGNSHDGLTYFYTRLPAGVNFRLEADFTLNQFGP
ENGAKPAGQEGAGLLVRDILGTPREAVTKPGIEELPAASNMVMNSVLATGDTLPVLALIA
RQGVQQQWGNTGISIVRKSYHTLTTPAHFSLRLTRTDNSFDVAYAPQGSDQWISQSVAGA
DRVTQLDNTGYYVGFFASRNASITVNHAKLTLDEAHTHASMPYVTPSLKARVEVMSSPLI
TRRDSVIQWRTNGDGQLQIEQDGKPLLRQTAVRAGEVMTVPFHAQQPVTPLQITFTPYKG
TPVTLEFPLNMALVSNPDELHVSPQGEAGNDGSAQHPLDFASAVNLLAPGGTLWLAEGEY
PAAVIPATASGTEKNRKTLRAQGDNVVFNGLKLDASFWNIQGITVTQKSFHIAGSYNHID
RVKAHHADDTGIWVASPDGIGRALWASHNLISHSESWGNQDPGRKNADGFAVKMRVGDGN
RLVNCYSHDNIDDGFDLFNKIEDGPNGSVTIENSLSVHNGSNGFKLGGEGLPVAHVIRQS
VAVENGMDGFTDNFNPGALVVEGNRAVDNKRFNFLFRPSPYTTADKQGTFKDNLSLRTSP
GKYDDAVTGNVDDSNYFYTGHKTVNKQSKDIQPGDFISLRLPDPITRLSDGGFNYADFLK
KK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatcaaaatttgttattgccgcgctgtccctcgggatgggcgcacaaagcatc
gccgctgcattgcctgacgccagtaaactggtctggcacagcatcacgtttggtcagtct
actgacgttaattttgccaccaacgttttgccccaaaaaatcggtatgaacgaaacccgg
ctcgctgatggaaaaccggtgcctgccgcaggcacgttgctcagcacgccgtttacgctg
gaaagccgcggcggcaaggtcggaaacagtcacgatggtctgacctatttctacacacga
ttaccggctggagtaaatttccgccttgaggccgatttcacccttaaccagttcgggccg
gaaaacggcgcaaaaccggcggggcaggaaggcgccggattactggtgcgcgacattctg
ggcacaccgcgtgaagcggtgaccaaaccgggcattgaagaattaccggccgcatcaaat
atggtgatgaacagcgtgctggccaccggcgatacactgccggttctggcgctgattgcc
cgtcagggcgtgcagcaacagtggggaaataccggtatcagcattgtgcgtaagagttat
cacacgctcaccacgcctgcgcatttttcattacgcctgacccgcacggataacagcttt
gatgtcgcttacgcgccgcagggcagcgaccagtggatcagtcagtccgtcgcaggcgct
gaccgcgtgacgcaactggataataccggttattacgtcgggttcttcgcatcacgtaat
gccagcatcacagtgaatcacgcgaaactgacccttgatgaagcgcatacccatgcctcc
atgccgtatgtgacaccgtcacttaaagcgcgtgtggaagtgatgtcctcaccgctgatc
acccggcgcgacagcgtgatccagtggcgtaccaacggtgatggtcagttacagattgag
caggatggcaaacctttactgcgccagaccgccgtacgcgccggtgaggtgatgaccgtg
ccattccacgcgcagcagcctgtcacaccgttacagataacctttacaccgtataagggc
acaccggtcacactggaattcccgctcaacatggcactggtgagtaaccctgatgaattg
catgtgtccccgcagggcgaggccggtaacgacggttccgcgcaacatccgctggatttc
gccagtgcagtgaatctgttagcgccaggcggcacattatggctggcggagggggaatat
ccggcggcggtgataccggcaacggccagcggcacggagaaaaaccgtaaaacgttgcgt
gcgcagggcgataacgtggtgtttaacgggctgaaacttgacgccagcttctggaatatt
cagggcattaccgttacccaaaaaagcttccacattgccggcagctacaaccatatcgat
cgcgtgaaagctcatcacgccgatgataccggcatttgggtcgcctcaccggacggtatt
ggccgtgcattgtgggccagccataacctgatcagccattcagaatcctgggggaatcag
gatccgggacgcaaaaacgccgacggcttcgcggtaaaaatgcgcgttggcgacggtaac
cggctggtgaattgctattcccatgacaacatcgacgacggcttcgacttattcaacaag
attgaggacggtccgaacggcagcgtgacgattgaaaacagcctgtcggttcacaacggc
agcaacggtttcaaactgggcggcgaaggcttacctgttgcgcacgttatccgtcaaagt
gtggcagttgaaaacggcatggatggcttcaccgacaactttaaccccggtgcgctggtg
gtcgaaggcaaccgcgcggtggacaacaaacgcttcaacttcctgttccgcccgtcccct
tacaccacagctgataagcagggtaccttcaaagacaacctttccctgcgcacttcgccg
gggaaatatgatgatgctgtgaccggaaatgtggacgacagtaattatttttataccggc
cataaaacggtaaataaacagagtaaagatattcagcccggagattttatttctttgcgg
ctgccggatccgataacccgtctttctgatggtggatttaattacgctgactttctgaag
aaaaaatga
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