Rahnella bonaserana: QNM34_11570
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Entry
QNM34_11570 CDS
T09076
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbon03016
]
QNM34_11570
Enzymes [BR:
rbon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QNM34_11570
Transfer RNA biogenesis [BR:
rbon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QNM34_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
CFSR
ODP
Motif
Other DBs
NCBI-ProteinID:
WHZ38730
LinkDB
All DBs
Position
2560303..2562246
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AA seq
647 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRVEGIVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV
IASLQTEKEREIVQPETLVEPFLSRFVGRVTRKDDRLSIIPDHPLLRDSIQCRVARNINH
EVSDGDWCVAEMRRHPLKEGDHSFQAEITEWITTGTDDLAPWWVTLARHNLEREAPKSDI
AELRDEGLTREDLTALPFVTIDSGSTQDMDDALYVKDNGDGTLQMTIAIADPTAYVSEGS
DLDNIAKKRAFTNYLPGFNIPMLPRELSDDICSLWPDVSRPVLACSVTLGTEGALGSDIR
FFAATIESKAKLAYDDVSDWLEADEKSEWQPASDVIASQIRLLKRVCDLRSTWRTEHALV
FKDRPDYRFVLGEKGNVLEIVAEHRRIANRIVEESMIAANVCAAIALRDSLGFGVYNVHT
GFDPLLVENAVTVLQANDVEANAEELLTLPGFCALRRKLDALPTQFLDSRIRRFQTFAEI
STTPGPHYGLGLEAYATWTSPIRKYGDMVNHRLLKAMILQQSAEKPQDDMTVQLAERRRA
NRMAERDVGDWLYARYLEDKVGTDVKFSAEIIDVTRGGLRVRLQDIGAVAFIPAPFLHSV
RDELVCSADTGTVLIKGEVAYRQSDIIDVNIAEVRMENRNVIAKPAV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctcgcgcagctaaaacagcaacttcactctcagactccg
cgtgtcgaaggcatcgtgaaaggcactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctatttcattccgcctccgtacatgaaaaaagtcatgcacggggatcgcgtc
attgcctccctgcaaacagagaaagagcgtgaaatcgttcagccggaaacgctggttgag
ccgttccttagtcgttttgtaggccgcgtgaccaggaaagacgaccgtctttctatcatt
ccggaccaccctttattacgtgattccattcagtgccgcgttgcccgcaatatcaatcat
gaagtgagcgacggcgactggtgtgtggctgaaatgcgccgccacccgctgaaagaaggc
gatcacagcttccaggctgaaatcaccgaatggatcaccaccggcactgacgatctcgcg
ccgtggtgggtgacgctggcacgtcataatctcgaacgtgaagcgccaaaatctgacatc
gcagaactgcgcgatgaaggcctgacccgcgaagatctgactgccctgccatttgtcacc
atcgacagcggcagcacgcaggatatggatgacgcgctgtatgtgaaagacaacggcgac
ggcaccctgcaaatgactatcgcgattgccgacccgacggcttacgtcagtgaaggcagc
gatctcgacaatatcgccaaaaaacgcgcattcaccaactatctgccgggtttcaacatc
ccgatgctgccgcgtgaattgtctgatgatatctgttctttgtggccggatgtcagccgt
ccggttctggcgtgctctgtgacgttgggcaccgaaggtgcactgggcagtgatattcgt
ttctttgccgcgaccatcgaatcgaaagctaagctggcctacgatgatgtgtctgactgg
ctggaagcggatgagaaaagcgaatggcaaccggccagcgatgtgattgcctcgcaaatc
cgtctgctgaaacgcgtctgtgacctgcgcagcacatggcgcactgaacacgcgctggtg
tttaaagaccgtcctgattaccgcttcgtattgggtgagaaaggcaacgtgctggaaatc
gtcgctgaacatcgccgtatcgctaaccgcatcgtggaagaatccatgattgccgccaac
gtctgtgcagctatcgccctgcgcgacagcctcggtttcggcgtttacaacgtgcatact
ggttttgatccgctgctggtagaaaacgcagtgaccgtgttgcaggccaacgacgttgaa
gctaatgctgaagaactgctgacgctgccaggtttctgcgcattgcgccgtaaactggat
gcgctgccaacgcagttcctcgacagccgtatccgtcgtttccagacgtttgcagaaatc
agcaccactccagggccgcattatggtctgggtctggaagcttacgccacctggacatca
ccaatccgtaaatacggtgacatggtgaatcaccgtctgctgaaagcaatgatcctgcaa
cagtctgctgagaaacctcaggacgacatgaccgttcagctggcagagcgtcgccgtgct
aaccgcatggccgaacgtgatgtcggtgactggctgtatgcgcgctatctggaagataaa
gtcggtactgacgttaagttcagcgctgaaatcattgatgtcacccgcggcggtctgcgt
gtgcgtctgcaagacatcggcgcagtggcgttcatcccggctccgttcctgcacagcgtg
cgcgacgaactggtatgcagtgctgatactggcaccgtgctgattaaaggcgaagtggcc
taccgtcagagcgatatcattgatgtgaacattgcggaagttcgcatggaaaatcgtaac
gtgatcgccaaacccgcagtttag
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