Rahnella bonaserana: QNM34_13255
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Entry
QNM34_13255 CDS
T09076
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00300
Lysine biosynthesis
rbon00470
D-Amino acid metabolism
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01120
Microbial metabolism in diverse environments
rbon01230
Biosynthesis of amino acids
Module
rbon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QNM34_13255 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QNM34_13255 (dapF)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QNM34_13255 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WHZ39036
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Position
2940081..2940920
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AA seq
279 aa
AA seq
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MIFHRYHGLGNDYLVCHHSVAALISNEQIQRLCDRHYGIGSDGLLIDHDDADISSLRIIN
PDGSEAEKSGNGLRIYARYLFDIGRVKHEPFLVNTPGGQVRCEVTEGAHQVIVDMGQAKF
SPAALPATVEGNEALALPLLAGGHNLSATLVSMGNPHCVIRVDKLDLEQVKQLGSEIETL
AIFPKRTNVQFAQVLDRNNITIGIWERGAGYTLASGSSSCAAASAMRKLGLVDENVTVHM
PGGKLAISFSGDFQVNMRGPVQKIATITLDNDCFWDMTT
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcaccgctatcacgggctgggtaatgattatctggtctgccatcacagcgta
gccgccctgatcagtaatgagcaaattcagcgactctgcgaccgtcattacggtatcggg
tccgacggtttgctgattgaccatgacgacgctgatatttcttccctgcgcatcatcaat
cccgacggttcagaggccgagaaaagcggcaacggcctgcggatttacgcccgctatctg
tttgatattggccgcgtgaagcatgaaccgtttctggtgaatacccccggcgggcaggtg
cgttgcgaagtcaccgaaggtgcgcatcaggtgattgtcgatatggggcaggcaaaattt
tctccggcggctttaccggcaaccgttgaaggtaatgaagcccttgccttgccactgctc
gcgggcggacataacctcagtgcgacgctggtgtcgatgggcaatccgcactgcgtgatc
cgcgtggataaactggatttagaacaggtgaaacaactgggttctgaaatcgaaacactg
gcgattttcccgaaacgtaccaacgtgcagttcgcgcaggtgctggacagaaacaacatc
acgatcggcatctgggagcgcggcgcgggttatacgctggcctccggcagcagcagttgt
gcggccgccagcgcgatgcgcaaactggggctggtggatgaaaatgtcacggtacatatg
ccgggcggaaaactggccatcagcttcagcggcgattttcaggtcaacatgcgcgggccg
gtgcagaaaattgccacaattaccctcgataacgactgtttctgggatatgacgacgtag
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