Rahnella bonaserana: QNM34_13280
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Entry
QNM34_13280 CDS
T09076
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbon03000
]
QNM34_13280
Transcription factors [BR:
rbon03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QNM34_13280
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
SBP_bac_3
TP6A_N
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WHZ39041
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Position
complement(2945406..2946620)
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AA seq
404 aa
AA seq
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MAESEVLSNLMQIRAFCQVVDQGSVSRAADELYRTQSAVTRAIRDLEQALDVPLFERHAN
GMLLTDFGKCVLPRARRAIAELRQIPLQLAKLQGKSGQRRGDTEPLYLFNVRRLQIFISL
CKTRHMQTVATLLGLSQPAVSAALKVLENGAGLALLERTPHGMMPSLAGQDIVPNLRRAL
NELRHIPADIAARRGVLEGMVQVGALPLGRTRLLPQAIIGLTQRYSGVKVVTNESAFSAL
ASELRSGEVDFIFGALRSSDYAADMATETLFTESMVILARKGHPLLGGAVTQAHLRQARW
VLPRAETPARRLLDNSFAAMNMPPPDPVVESGDLGIVRGLLLGSDMLAAVSARQLEHELE
SGELVKLPLDLADTHRAIGLTFRAGSLLSPAAEALVAEIRKVCS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtctgaggtgctgagtaacctgatgcaaatacgggcattttgtcaggttgtc
gatcagggaagcgtatcccgcgcggccgatgagctttaccgcacgcagtcggcggtcaca
cgggcgatccgcgacctggaacaggcgcttgatgtcccgttgtttgaacgtcatgccaac
ggcatgttgctgaccgatttcggtaaatgcgtgctgccacgtgcgcgacgggcgattgcc
gagctgcgtcagatccccttacagctggcgaaattacagggtaaaagcgggcaacggcgc
ggtgataccgaaccgctgtatctgtttaacgtccggcgtttgcaaatttttatctcgctg
tgcaaaacgcggcatatgcagacggtcgccacattgctcggcctcagccagcccgcggtc
agtgccgccctgaaagtgctggaaaacggagccggtctggcgctgctcgagcgtacgccg
cacggcatgatgccgtcgcttgccgggcaggatatcgtgccgaacctgcgccgcgcgctc
aacgaactccggcatattcccgctgatattgccgcccgccgcggtgtactggaaggaatg
gtgcaggtgggtgcgttgccgctcgggcgcacgcgactgttgccacaggcgattatcggc
ctcacgcaacgctacagtggcgttaaagtggtgactaacgaaagtgccttcagcgcactg
gcatcggaactgcgttccggcgaagtggatttcatttttggtgcgctgcgttccagtgat
tacgcggcggatatggcgacggaaacgttgtttaccgaaagtatggtgatactggcaaga
aagggacatccgttgctgggcggcgctgtgacgcaggcacatttacgccaggcgcgctgg
gtattgccgcgcgccgaaacaccggcaaggcgactgctggacaacagttttgccgcaatg
aatatgccaccgcccgatccggtggttgaaagcggcgatctcgggattgtacgcgggttg
ctgctcggttcggacatgctggcagcagtatcagcccgccagctggagcacgaacttgag
tccggcgaactggttaaactgccgctggatctggccgatacgcaccgcgccatcggcctg
acattccgcgccggcagcctgctgtcaccggcggcggaagcactggtggcagaaatccga
aaggtttgcagctaa
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