Rahnella bonaserana: QNM34_14810
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Entry
QNM34_14810 CDS
T09076
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbon03009
]
QNM34_14810 (dbpA)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QNM34_14810 (dbpA)
Ribosome biogenesis [BR:
rbon03009
]
Prokaryotic type
rRNA helicases
QNM34_14810 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Toxin_2
Helicase_C_2
P-loop_SecA
Ebola-like_HR1-HR2
Toxin_3
DUF359
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHZ39314
LinkDB
All DBs
Position
complement(3253966..3255348)
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AA seq
460 aa
AA seq
DB search
MSTHSFSALTLPAEQLSNLNELGYTEMTPIQEASLPAILQGQDVRAKAKTGSGKTAAFGI
GLLNSITVSQFVAQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQAIGPQLESL
VHPPHIVVGTPGRIQEHLRKGTLKLDELKVLVLDEADRMLDMGFSEDIEDVVSYTPQDRQ
TLLFSATYPDGIERISSKFQRQPLKVEIEGEDDIADIQQIFIEAGKQQRLSLLAAVLYQH
QPTSCVVFCNTKRDCQDVCEDLKAKGISALALNGDLEQRDRDRVLVRFSNGSCRVLVATD
VAARGLDIKQLGLVINYELSFDPEVHVHRVGRTGRAGTSGLAVSLVTPQEMPRVTALEDY
TRQRFTWQPAAQALAATPVALDPEMATLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRQKSAKKALQRLQEGKIKGKNCKAIILR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgcattccttttctgccctgacattgcccgctgagcaactttccaacctgaat
gaactgggttacaccgaaatgaccccgattcaggaagcctctttgcctgccattctgcaa
ggtcaggacgttcgcgccaaagccaaaaccggcagcggtaaaacggccgcctttggtatc
ggtttgctgaacagcattaccgtttcacaatttgttgctcaggcgctggtactgtgtccg
acccgggaactggccgatcaggtcagtaaagagttacgccgtctggcgcgttttacccag
aacatcaaaattctgaccctctgtggcggccaggcaatcgggccacagctcgaatcgctg
gtgcatccgccacacatcgtggtgggtacgccgggccgtattcaggaacacctgcgtaaa
ggcacgctcaagctcgacgagctgaaagtgctggtgctggatgaagccgaccgcatgctg
gacatgggtttcagcgaagatattgaagatgtggtcagctatacgccgcaggatcgccag
accttgctgttctccgcgacttatccggatggcattgagcgcatcagttctaaattccag
cgtcagccgctcaaagtagaaattgaaggcgaagatgatattgccgatattcagcagatc
ttcatcgaagccggtaagcagcagcgtttatctctgcttgctgcggtgctttatcagcat
cagccaacgtcctgcgtggtgttctgtaacaccaagcgtgactgtcaggatgtgtgtgaa
gacctgaaagcgaaaggcatcagtgcgctggcgttgaatggcgatcttgaacagcgtgac
cgcgatcgcgttctggtgcgtttctccaacggcagttgtcgtgttctggtggcgacagac
gttgctgcgcgcgggctggacattaaacagctgggactggtgatcaactacgagctgtct
ttcgatcctgaagttcacgttcaccgtgtgggtcgtaccggccgtgcagggacgagcggt
ctggccgtcagcctggtgacgccgcaggaaatgccgcgtgtgaccgcactggaagattat
acccgacagcgtttcacctggcagcctgctgctcaggcactggccgcaacgccggtggcg
ctcgatcctgaaatggcgacattgtgtattgatggcggccgcaaagccaaaatccgtccc
ggcgatattctcggtgcgctgactggcgatgcgggactgaccgccgccgaagtcggtaaa
atcgatatgttcccggttcacgcttatgtggcgatccgccagaaaagcgccaagaaagca
ttacagcgtttgcaggaagggaaaatcaaaggcaaaaactgtaaggccatcattttacgt
taa
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