Rahnella bonaserana: QNM34_15135
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Entry
QNM34_15135 CDS
T09076
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03030
DNA replication
rbon03430
Mismatch repair
rbon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNM34_15135 (holB)
03430 Mismatch repair
QNM34_15135 (holB)
03440 Homologous recombination
QNM34_15135 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbon03032
]
QNM34_15135 (holB)
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_15135 (holB)
Enzymes [BR:
rbon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNM34_15135 (holB)
DNA replication proteins [BR:
rbon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNM34_15135 (holB)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNM34_15135 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6587
Motif
Other DBs
NCBI-ProteinID:
WHZ39375
LinkDB
All DBs
Position
complement(3320957..3321976)
Genome browser
AA seq
339 aa
AA seq
DB search
MNWYPWLSAPYRQLTGQYLTGRGHHAVLMHAAAGIGDEALVYGLSRWLLCQHKDGEKSCG
TCHSCQLMIAGNHPDWHILQPEKGKNSLGIDPVRQLIETLYNYSQQGGSKVVWIPQTELL
TEAAANALLKTLEEPPAGTYFLLGCREPSALLATIRSRCFYWHLPVPEETLAVQWINRQL
SADPVSIKTALRLTNGAPLSAIELLQPERWKQRVALCQQLYTQCQQQDMLSLLPQLNHDD
APERLYWLATLLLDAIKWQQHAGQFIINHDQQPLIALLAGAQSSVALQQSVSAWMHCRHQ
LLSIVGVNRELLLTEQLLEWEQMLQGTVSASIFSSALSR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtatccgtggctcagcgcgccttaccgccaactgacaggtcaatatttgaca
ggccgcggtcatcatgcggttctcatgcatgccgccgcaggtatcggggatgaggcgctg
gtatatggtctgagccgctggctgctgtgccagcataaggacggcgaaaagagttgtggt
acatgccacagctgtcagctgatgattgccggcaaccatcctgactggcatatcctgcaa
cctgaaaagggaaaaaactcgctgggcattgacccggtgcgtcagctcatcgaaacgctc
tacaattattcccaacagggcggttcgaaagttgtctggatcccgcaaacggaattgctg
accgaagccgcggcaaatgccttgctgaaaacgctggaagagccgccagccggtacctat
ttcctgctgggatgtcgtgagccttcggcgctactggcgacaatccgcagccgctgtttt
tactggcatctgccggtgccggaagaaacgctggcagtgcagtggatcaaccgtcagctc
agtgctgatcctgtatcgattaaaacggcattgcgtctgactaacggtgcgccattgtca
gccattgaactgttgcagccggaacgctggaagcaacgcgtggcattatgtcagcagctt
tatacgcaatgtcagcaacaggatatgctttccctcttgccgcagcttaatcatgatgat
gcgcctgagcgcctttactggctggcgacgttactgcttgatgccatcaaatggcaacag
cacgcaggacaattcatcatcaatcatgaccagcagccgttaattgcgttgctcgccggt
gcgcagtccagcgtagctttacagcaatcggtgagtgcctggatgcattgccgccatcag
ttgctttctatcgtcggcgttaaccgtgagttattgctgaccgaacaactccttgagtgg
gaacaaatgcttcagggtaccgtttctgcgtcgattttcagttccgcgctttcgcgctga
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