Rahnella bonaserana: QNM34_15885
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Entry
QNM34_15885 CDS
T09076
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rbon
Rahnella bonaserana
Pathway
rbon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNM34_15885 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_15885 (uvrB)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNM34_15885 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QNM34_15885 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
LIN52
AAA_22
SBDS_domain_II
DUF87
Motif
Other DBs
NCBI-ProteinID:
WHZ39516
LinkDB
All DBs
Position
complement(3465454..3467460)
Genome browser
AA seq
668 aa
AA seq
DB search
MSKEFKLHSEFKPSGDQPEAIRRLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLAELQ
YSRNDQAFQRSTFRVRGEVIDVFPAESDDLALRIELFDQEVERLSLFDPLTGQVQHEVPR
FTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANNKLLEEQRISQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQSIYVSATPGKYELEKSGDDVVDQVVRPTGLLD
PIIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITNSMARAIEETERRRAKQEAYNLENGITPMGLNKKISDILQLG
QPKTKKNKDKRDAEAAQTFKSLTPKALEQRIKELESKMYAHAQNLEFEEAANTRDELHAL
REQFIAIS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagttcaaactgcattccgaatttaaaccgtcaggcgatcagcctgaggcg
atacgccgtctggaagaagggctggagaacgggctggcgcaccagacgttgctcggggtg
accggttcaggcaaaacttttactgtggcgaacgtgattgctgacctgaaccgtccgacg
atggtgcttgccccgaacaaaacgctcgcggcgcagctttatggcgagatgaaagagttc
tttccggagaacgccgtcgaatattttgtctcctactacgattactatcagcctgaggcg
tatgtcccaagctcagacacatttattgaaaaagacgcctcagtgaacgaacacatcgag
caaatgcgtctttccgcgactaaagccctgctggaacgccgcgatgtcatcgtggtagcg
tcagtttctgcgatctacggtctgggtgacccggacttgtatctgaaaatgatgctgcac
ctgaccaaagggatgattatcgatcagcgagccatcctgcgtcgtctggcggaactgcaa
tattcccgtaacgatcaggctttccagcgcagtacttttcgtgtgcgcggcgaagtcatt
gatgtgtttccggctgaatctgatgatctggcgctgcgcatcgaactgtttgatcaggaa
gttgaacgcctgtcgctgtttgatccgctgaccggtcaggttcagcacgaagtgccgcgt
ttcaccatctacccgaaaacgcactacgtgaccccgcgggaacgtatcgtgcaggcgatg
gaagaaatcaaagtcgaactggccgatcgccgcaaagtgctgctggccaataacaaactg
ctggaagagcagcgcatcagccagcgcacgcagtttgatctcgaaatgatgaacgagctg
ggttactgctccggtatcgaaaactactcgcgctacctttcaggacgcgggccgggcgag
ccgccgccgacactgtttgactatctgcccgcagacggtctgctgattgtggatgaatcc
cacgtgaccattccgcaaatcggcgggatgtacaaaggcgaccgctcgcgtaaagaaacg
ctggtggaatacggtttccgtctgccatcagcgctggataaccgtccgatgcgctttgag
gaattcgaagcgctcgcgccgcaaagtatttatgtctcggccacgccgggtaaatacgaa
ctggagaaatccggtgatgatgtcgtcgatcaggtggtgcgtccgaccggtctgctggat
ccgatcatcgaagtgcgtccggtgaccacgcaggttgacgacttgctgtctgagatccgt
aaacgtgtggcaattaacgagcgtgtgctggtcactacgctgaccaagcgtatggcggaa
gacctgactgagtatctggaagaacacggcgagaaggtgcgttacctgcactctgacatc
gataccgtcgagcgtgtggagatcatccgcgatttgcgtctgggagaattcgatgtgctg
gtcggcatcaacttactgcgcgaaggcctggatatgccggaagtctcgctggtggcgatc
ctggatgcggacaaagaaggcttcctgcgttctgaacgctcgcttatccagaccatcggt
cgtgcggcgcgtaacctcaacggtaaagcgattctctacggtgataaaattaccaactcg
atggcccgcgccattgaagaaaccgaacgtcgccgcgccaaacaggaagcgtacaacctc
gaaaacggtatcacgccgatggggctgaacaagaagatttccgacatcctgcaacttggt
cagccgaagaccaaaaagaacaaagacaaacgcgatgcagaagcggcgcaaactttcaaa
tcgcttacgccgaaagcgctggagcaacgcatcaaagagctggaaagcaagatgtatgca
cacgcgcaaaatctggaattcgaagaagcggccaacacccgcgacgagttgcatgcatta
cgcgagcagtttattgccatttcataa
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