Rahnella bonaserana: QNM34_16290
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Entry
QNM34_16290 CDS
T09076
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_16290 (phrB)
Enzymes [BR:
rbon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
QNM34_16290 (phrB)
DNA repair and recombination proteins [BR:
rbon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
QNM34_16290 (phrB)
Prokaryotic type
QNM34_16290 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WHZ39588
LinkDB
All DBs
Position
complement(3540982..3542412)
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AA seq
476 aa
AA seq
DB search
MTTHLVWFRNDLRITDNRALHAACEDPQARVIALFIATPEQWKQHEMAPRQAMFIYQHLQ
ALQHSLAERGIGLHYHQCDDFAESVDWLRDFCKAEKVDALFYNKQYEFNERQRDAALENA
VSESVICHAFDDSLLLPPGSVTTGNNEMYKVYTPFRRAFLSRLTESDSRSLPAPPARENA
GKVVIHRLMPFDYPLADIGDDFAIGEEAARHQLRSFCREQVQDYLEQRDLPAVDGTSSLS
PYLAIGVLSPRQCLNRLRTECPDVLEKTDGGAFGWLNELVWREFYRHLIVAWPKLCKHQP
FVEWTDNVRWRHAPEELQAWKDGKTGYPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLL
INWREGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPYFRIFNPTTQGERFDKAGRFIK
AWVPELADVPERDIHQPHRWAEKHHRVLDYPQPVIDHARARKDTLAAFEAAKNRSD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatttagtctggttccgcaatgacctgcggataaccgataaccgcgcgttg
catgctgcctgtgaagacccgcaggcgcgtgtgattgccctttttatcgccacgccggaa
cagtggaaacagcatgaaatggcaccacggcaggcgatgtttatctatcagcatcttcag
gcactgcaacattctctggctgagcgcggtatcggactgcattaccatcagtgtgatgat
tttgctgaaagcgtggactggctgagggatttctgtaaagccgaaaaagtggatgccctg
ttttacaacaaacagtatgaattcaatgaacgtcagcgggacgctgcactggagaacgcg
gtcagtgaatcggtcatctgccacgcgtttgacgacagcctgctgctgccgccgggttcg
gtcacgaccggcaataatgagatgtacaaggtttatacgccttttcgccgcgcgttttta
tcccgcctgactgaatccgacagccgttctttgcctgcgccaccagcccgggaaaatgcc
ggaaaagtggtgatacaccggctgatgccattcgattatcctcttgccgatattggtgat
gattttgcgattggcgaagaagctgcccgtcatcagttgcgcagtttctgccgtgagcag
gtacaggattatcttgaacagcgcgatttaccggcggtcgacggcaccagttcgctgtcg
ccttatctggctatcggtgtgctttcgccgcgtcagtgtcttaaccgtctgcgcaccgaa
tgtccggatgtgctggagaaaaccgacggcggcgcgtttggctggctgaatgagctggtg
tggcgtgagttttatcgtcatctgattgtcgcctggcctaagctttgcaagcatcagcca
tttgtggaatggaccgacaacgtgcgctggcgtcatgcaccggaagagttacaggcgtgg
aaagacgggaaaaccggttatccgattgtagatgcggcaatgcgtcagcttaatgcgaca
ggctggatgcataaccgcctgcgtatgattgtcgccagttttttggtgaaagatctgctg
atcaactggcgcgaaggcgagcgttatttcatgtcgcaactgctcgacggcgatctggcg
gccaacaatggtggctggcagtggggcgcgtctaccggcaccgacgccgcaccgtatttc
cgtattttcaacccgaccacgcagggtgaacgttttgacaaagccggacgctttatcaaa
gcctgggtgcctgaactggcggatgtgccagaaagagacattcatcaaccccatcgctgg
gcggaaaaacaccatcgcgtgctagactacccgcagccggttattgatcacgcgcgggcg
agaaaagacacgctcgcggcgtttgaggcggcaaaaaaccggtctgactga
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