Rahnella bonaserana: QNM34_17250
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Entry
QNM34_17250 CDS
T09076
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbon03032
]
QNM34_17250 (hupB)
03036 Chromosome and associated proteins [BR:
rbon03036
]
QNM34_17250 (hupB)
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_17250 (hupB)
DNA replication proteins [BR:
rbon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QNM34_17250 (hupB)
Chromosome and associated proteins [BR:
rbon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QNM34_17250 (hupB)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QNM34_17250 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WHZ39760
LinkDB
All DBs
Position
complement(3743859..3744134)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRVLDAVLASVTDTLKAGDEVALVGFGTFSVRERSARTG
RNPQTGKEISIAAAKVPGFRAGKALKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaattgatcgacaaaattgctgccggtgctgatatttctaaagccgca
gcgggacgtgttttagatgctgttcttgcatctgtcactgacaccctgaaagctggggat
gaagtagctctggtaggtttcggtactttctccgtgcgtgaacgttcagcacgtactggt
cgtaacccacagaccggtaaagaaatcagcattgcagcagccaaagtacctggcttccgt
gcaggtaaagcgctgaaagatgccgtaaacggctaa
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