Rahnella bonaserana: QNM34_17470
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Entry
QNM34_17470 CDS
T09076
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_17470 (sbcC)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNM34_17470 (sbcC)
Archaeal homologous recombinant proteins
QNM34_17470 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
cobW
nSTAND3
TsaE
NTPase_1
AAA_22
FAM25
Motif
Other DBs
NCBI-ProteinID:
WHZ39803
LinkDB
All DBs
Position
3793455..3796703
Genome browser
AA seq
1082 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNITPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNSPDGNLQAPKVELALLAD
GKILADKVRDKLDAIATLTGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGLLSERVFEQHKEARITLDGLHQRMAGIELLSEEQRQTLEAQLAELNAQEINLSQQAQQ
RQQDLNWLQQWQQVQQKQQQSQLQLIAAEQENLAAAPQLQQLARSEPAEKLRPLLNDRQR
CQDESQRLQQQLTLLTQQQEQQIAQMTPLNLAVEQGQTARQKQAEEQRQMQALIEEKILP
LDGEIIQWRKSLTETQQSVTDVQKLVSEHNATLAQMTAERQKLDEENRQHQARQTALTDA
LNAAQQRQTELEKQHPLTILQKRQTELTQLRPVRQQLFSLSQIFPQLNQRVQQQHKDLTQ
YQTQLAEEEQRLGTLRLQCQKQLEHLNDVKALHKQEMLIVSLEAERANLQSGKACPLCGS
TSHPAIEHYQEVKPSETAQRVEKMQLEFDAAKASGIELAAKIKSLKEQQTRLQIQLEQDQ
QQLNAHAEKWQQLSAPLNLTFTLHDSADITQWLTARDEEEQQSQALISQHEQLARSLQQA
KDALNDALIAQQKVQQQSALLTERVTRLEETQAKSQQDVQRLQKLFAEGEKNLSELTARR
HELFGDRVVAQVREHLHQQQQAAEKALSDAQTALQKAQEQRDQLAGQLASTQQQQLQAAT
RLTQAENAWQQALNASGFTDEAAVKLALLDDVLRQQLQQRKERLQQQLAQAQALRADASQ
QLEKHRLARPAHLNETDSDLDALTAQQAELSQQLKALQQRLGEVKNQLESDKQRHSGQQA
LIAQIAQAQLTCDDWGYLNQMIGSSDGAKFRKFAQGLTLDHLVYLANRQLEKLHGRYLLQ
RKTSDALELQVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVTKVNGLGVSRLSSEF
KV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtttaaaaaacctgaattcgctggaaggcgaatggaaaatt
gatttcaccgccgagccttttgccagcaacggattgttcgccatcaccggcccgaccggc
gcggggaaaaccaccctgctcgatgccatctgtctggcgctttatcatcagacgccacgc
cttaacatcacgcccagtcagaatgagctgatgacccgtcacactgcggaatcactggcg
gaggttgagtttgaagtcaaaggcgtgggttaccgtgcgttctggagccagcgtcgcgcc
aaaaactcgccggacggtaatctgcaggcccccaaagtcgaactggcgttactggccgac
ggcaaaattctggccgataaagtgcgtgacaaactcgatgccatcgccactctgaccgga
ctggatttcggtcgcttcaccaaatccatgatgctgtctcaggggcagtttgccgcgttt
ctgaatgctgatgccaatgaccgcgccgaactgctggaagaactgaccggcaccgaaatt
tacgggctgctgtctgagcgcgtatttgaacagcataaagaagcaaggataacgctcgac
ggtttgcatcagcgcatggccggtatcgaactgcttagcgaggaacagcgccagacgctc
gaggcacaacttgctgaacttaacgcgcaggaaatcaacctcagtcagcaggcgcagcag
cgccagcaagatctgaactggctgcaacaatggcagcaggtgcagcaaaaacagcagcaa
tctcagctacagctgatcgccgccgagcaggagaatctggctgccgcgccgcaattgcag
caactggcacgcagcgaaccggcagaaaaactgcgtccgttgctcaatgatcgccagcgt
tgtcaggatgaatcgcagcgtcttcagcagcaactgacgcttctgacgcagcagcaggaa
cagcagatcgcgcagatgacgccgctgaatctggcggtggaacaggggcaaacggcacgt
cagaaacaggcggaagaacagcgtcagatgcaggcgctgattgaagaaaaaatcctgccg
ctggatggcgagattatccagtggcgtaaatcactcactgaaacgcagcagtcggtcact
gacgtacagaaactggtcagtgagcataatgcaacactggcacaaatgaccgccgaacgg
cagaaactggacgaagaaaaccgccagcatcaggcccgccagaccgcgctgacagacgca
ctgaatgccgcgcaacagcgtcagacagagctggaaaaacagcatccgctgacgatcttg
cagaaacgacaaacggaactgacgcagttgcgtccggtacgtcagcagttgttttcactc
tcacaaattttcccgcagttgaaccagcgcgttcagcaacagcataaagatcttacgcag
tatcagacgcaactggctgaagaagaacagcgtctgggcaccctccgcctgcaatgccag
aaacagctggaacatctcaacgacgtcaaagcgctgcataaacaggaaatgctgatcgtc
agccttgaagccgaacgcgcaaatctgcaaagcggcaaagcctgcccgttgtgcggttcc
acatcgcatccggcgattgagcattatcaggaggtcaaaccctctgaaaccgcgcaacgc
gtcgagaaaatgcagctggaattcgatgcagcaaaagccagcggcatcgaactggcagcg
aaaatcaaaagcctgaaagaacagcaaacgcggctgcaaatccagctagagcaagaccag
cagcaactgaatgcgcatgccgaaaaatggcaacagctcagcgcaccgctgaatctgaca
tttacgctacatgacagcgccgacatcacacaatggctgaccgcccgcgatgaagaagaa
cagcaatcgcaggcactgatcagccagcatgaacagctggcgcggtcgctgcaacaggct
aaagatgccctgaatgacgccctgattgctcaacagaaagtgcagcagcaaagcgcattg
ctgaccgaacgtgttacccggctggaagagacgcaggcgaaatctcagcaggacgtccag
cggctgcaaaagttgtttgcagaaggcgaaaaaaacctttcagaactgactgcccgacgc
catgaattgttcggcgatcgcgtggtggcacaggttcgcgagcacttacatcagcaacag
caggcggcagaaaaagcgctcagtgacgcacaaaccgcactgcaaaaagcgcaggaacag
cgcgatcagctggccggtcagctggcgagtactcaacaacaacaattgcaggccgccacc
cggctgacacaggcagaaaacgcgtggcaacaggcgctgaacgccagcggatttaccgat
gaagccgcagtgaaactggcgctgcttgatgacgtactgcgtcagcaacttcagcaacgc
aaagaacgtctgcaacagcagctggcgcaggcgcaggcgttacgggcagatgccagtcag
cagctcgaaaaacatcgtcttgcccgccctgcccatctgaatgaaaccgacagtgatctt
gatgctctgacggcgcaacaggctgaactgtcgcaacagctgaaagcgttacagcaacgt
ctgggagaggtgaaaaatcagcttgaaagcgacaaacagcgccacagcggacaacaggcg
ctgatcgctcagattgcgcaggcgcagctgacgtgtgatgactggggctatctgaatcag
atgattggctccagcgacggcgcgaaattccgtaaatttgcgcagggtctgacgcttgat
catctggtgtatctggcaaaccgtcagctggaaaaactgcacggtcgttatctgttgcag
cgcaaaaccagcgatgcgctggaattacaggtggtcgatacctggcaggcggacgccgta
cgcgacacccgcaccttatccggcggcgaaagtttcctggtcagtctggcgctggcgctg
gcgctgtctgatctggtcagcgataaaacccgcattgactctttgttcctcgacgaaggt
ttcggcacactcgacgccgatacgctggacaccgcgctggatgcgctcgacagcctgaat
gcctcgggcaaaaccatcggcgtcatcagccatgtcgaagcaatgaaagatcgcattccg
gtgcagatcaaagtcaccaaagtgaacggtctgggcgtcagccgcctgagcagtgaattt
aaagtctga
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