Rahnella bonaserana: QNM34_18265
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Entry
QNM34_18265 CDS
T09076
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00330
Arginine and proline metabolism
rbon00480
Glutathione metabolism
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
QNM34_18265 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
QNM34_18265 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
QNM34_18265 (speF)
Enzymes [BR:
rbon01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
QNM34_18265 (speF)
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
CAGE1
Motif
Other DBs
NCBI-ProteinID:
WHZ39948
LinkDB
All DBs
Position
complement(3960557..3962719)
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AA seq
720 aa
AA seq
DB search
MKHLKLAASASVAPYLQTARLVVDLRRADYADVAAIIISVGDLNHGRLAEIETLGFGIPA
FVAVQGTEQVSPEFLPALKGVITLSDANQAFYAAQIESAAQAYEEALFPPFFDTLKKYVE
MENATFACPGHQGGEFFRRHPAGRQFYDFYGPNIFRSDMCNADVKLGDLLIHEGSAKDAQ
KYAAKVFSADKTYFVLNGTSAANKVVTNALLTRDDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPFGFIGGIDAACFDETYLRKQIKEVAPDRANEKRPFRLAIIQLGTYDGTVYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDNHIKGQKRHCSHKKLNNAFMMHASTSPFYPLFAALDVNARIHAGGSGKHM
WMECVKLGIETRKMLLDQCSMILPFVPPVVGGKRWQDHETNEMANDVRFFDFVPGERWHA
FDGYAEKQYFVDPCKLLLTTPGIDASSGKYTEFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAETPAKMQLLVEELVRFEQYIEEDAPLSEVLPTVYRKNEDRYRNYTIRQLCQEMH
NLYVSFDVKELQKEMFREKSFPKVVMNPQDAHNEFIRDNIELVAIGDAEGRIAAEGALPY
PPGVLCVVPGELWGGAVQRYFMALEEGINLLPGFSPELQGVYIEKKPVGWKRVMGYVLAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttaaaacttgcagcaagcgcttccgtcgccccttatctccagactgctcgt
ctggtcgttgacctgcgccgcgctgattacgcggacgtagcggccatcattatttctgtg
ggtgacctgaaccacggcaggctggcggagattgaaacgctgggattcggtattcccgcg
tttgttgcagtgcagggaaccgagcaggtttcgccggagtttttaccggcgttgaaaggc
gttatcacgttgtcggatgccaatcaggcgttttatgccgcacaaattgaatctgccgcg
caggcctatgaagaagccctgttcccgccgtttttcgacacgctgaaaaaatatgtcgag
atggaaaatgcgacgtttgcttgccccgggcatcagggcggagagtttttccgccgtcat
ccggcagggcgtcagttttatgatttctacggcccgaatattttccgttccgatatgtgt
aatgcggacgtcaaactgggcgatttgctgatccacgaaggttcggcgaaagacgcgcaa
aagtacgccgctaaagtcttcagcgccgataaaacctatttcgtccttaacggcacgtcg
gcggccaataaagtcgtcaccaacgcgttgctgacccgcgacgatctggtgctgttcgac
cgtaacaatcacaaatcaaaccaccacggcgcgctgttacaggcgggtgcaacgccggtt
tatctcgaaacagcacgcaatccgtttggttttatcggcggcatcgatgcggcctgtttc
gacgaaacttatttgcgtaaacaaattaaagaagtcgcgccggatcgcgctaacgagaaa
cggccgttccgcctggccatcatccagctcggtacctacgacggcaccgtgtataacgcg
cgtcaggtggtcgataaaatcggtcatctgtgcgattacattctgtttgattccgcatgg
gtgggttacgagcaattcataccgatgatgaaagaatgctcgccgttgctgctggaactt
aacgagaacgatccggggattatcgtcacgcagtcggtacataagcagcaggcaggattc
tcgcagacttcgcagatccataaaaaagacaatcacatcaagggtcagaagcgccattgc
agccataaaaagctcaacaatgcctttatgatgcacgcctcaaccagcccgttttatccg
ctgtttgccgcgctggacgtgaacgcgcgtattcatgccggcggcagcggtaaacatatg
tggatggagtgcgtgaagcttggcatcgaaacccgcaaaatgctgctggatcaatgttcg
atgattttgccgtttgttccgcctgtggtggggggaaagcgctggcaggatcatgaaacc
aatgagatggccaacgacgtacgtttctttgattttgtgccgggtgaacgctggcatgca
ttcgacggttatgccgaaaagcagtatttcgttgatccgtgcaagctgctgctgaccacg
ccgggcattgatgcgtcgagcggtaaatacactgagttcggcattccggcgaccattctg
gccaactatctgcgcgagaacggcattgtgccggagaaatgcgacctgaactcgatcctg
ttcctgctgacgcctgccgaaacgccggccaaaatgcagttgctggtggaagagctggtg
cgttttgagcaatacatcgaagaagatgcgccgctcagtgaagtgctgccgacggtgtat
cgtaaaaacgaagaccgttaccgcaattacaccatccgtcagctgtgtcaggaaatgcat
aatctgtacgtcagctttgatgtgaaagagctgcaaaaagagatgttccgcgagaaaagc
ttcccgaaagtggtgatgaacccacaggacgcacataacgagtttatccgcgataacatc
gagctggtggcgattggtgatgcggaaggacgtatcgccgcagaaggcgcgctgccgtat
cctccgggcgtgctctgcgtggtgcccggcgaattatggggcggggcagttcagcgttac
tttatggcgctggaagaaggcatcaacctgttaccgggcttttcgccggaattacagggt
gtgtatattgagaaaaagccggtcggctggaagcgcgtgatggggtatgttctcgcgcaa
tag
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