Rahnella bonaserana: QNM34_21105
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Entry
QNM34_21105 CDS
T09076
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00071
Fatty acid degradation
rbon00280
Valine, leucine and isoleucine degradation
rbon00310
Lysine degradation
rbon00362
Benzoate degradation
rbon00380
Tryptophan metabolism
rbon00410
beta-Alanine metabolism
rbon00640
Propanoate metabolism
rbon00650
Butanoate metabolism
rbon00907
Pinene, camphor and geraniol degradation
rbon00930
Caprolactam degradation
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01120
Microbial metabolism in diverse environments
rbon01200
Carbon metabolism
rbon01212
Fatty acid metabolism
Module
rbon_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
QNM34_21105 (fadB)
00650 Butanoate metabolism
QNM34_21105 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
QNM34_21105 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
QNM34_21105 (fadB)
00310 Lysine degradation
QNM34_21105 (fadB)
00380 Tryptophan metabolism
QNM34_21105 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
QNM34_21105 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
QNM34_21105 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
QNM34_21105 (fadB)
00930 Caprolactam degradation
QNM34_21105 (fadB)
Enzymes [BR:
rbon01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
QNM34_21105 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
QNM34_21105 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
QNM34_21105 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
QNM34_21105 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
WHZ40465
LinkDB
All DBs
Position
4608541..4610733
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLHLHWLDGGIAELVFDAPGSVNKLDTKTVASLGEAIAILEKQSDLKGLLLSSA
KPAFIVGADITEFLSLFNAPAEKLHEWLDFANSIFNRLEDLPVPTLSAISGYALGGGCEC
VLATDFRISTADARIGLPETSLGIMPGFGGSVRLPRLIGTDSALEIIAAGKNISGKEALK
VGLVDAVVEADKLRDAGITMLKNAIDGKLEWHSRRDPKRLPLKLSQIEAAMSFSVAKSMV
MQNAGKHYPAPMTAVKTIEAAARLGRDEALQLETASFVPLAQSKEARALVSIFLNDQFVK
GKARKLAQDSEKPKQAAVLGAGIMGGGIAYQSALKGVPVVMKDINDQSLTLGMNEAAKLL
NKQLERGKLDGLKMAKVLSTIHPTLDYSGIERASVVVEAVVENPKVKAAVLAEAESLLGA
DTILASNTSTIPIDQLASSLKRPENFCGMHFFNPVHRMPLVEIVRGEKTSDKTISRIVSY
ALAMGKTPIVVNDCPGFFVNRVLFPYFSGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMTRDYRDAVDVLFDNRRFGQKNQLGFYRYSEDSKGKP
RKEVDEQAISLLADNLKPAHADFSPQDIIARMMIPMINEVVRCFEEGIIASPAEADMALV
YGIGFPPFHGGPFRYLDTLGTAKYLKMTEQYAHLGPMYQAPEGLRAKAQTNESYYPVAAP
LENLSTGNQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacacctgcactggctcgacggcggtatcgcggagctg
gtgtttgatgctccaggctcggttaacaagctcgacaccaaaactgtcgccagcctgggc
gaagctattgcgatacttgaaaaacagtctgacctgaaaggtctgctgctcagttcagcc
aaaccggcgtttatcgtgggcgcggatatcactgaatttctgtctttatttaacgcacca
gcggaaaaattgcatgagtggctggatttcgccaacagcatttttaaccgtctggaagat
ttaccggtaccgaccctttctgccatcagcggttatgcgctgggcggcgggtgtgaatgc
gtgctggcgacggattttcgtatcagtaccgccgacgcacgtattggcctgccggaaacc
agcttagggatcatgccgggcttcggcggctccgttcgcttgccacgcctgattggtaca
gacagtgcgctggaaattatcgccgccggtaaaaatatcagcgggaaagaagccctgaaa
gtcgggctggtcgatgcggtggttgaagcggataaactgcgcgacgccggtatcaccatg
ctgaaaaatgccatcgacggcaaactggaatggcacagccgccgtgacccgaaacgtctg
ccactgaaactcagccagattgaagcggcgatgagcttcagcgtggctaaaagtatggtc
atgcaaaatgccggtaagcattatccggcaccaatgaccgcggtgaaaactattgaagcc
gcagcccgtctgggccgcgatgaagctttgcagctggaaaccgccagctttgtgccgctt
gcacaatcgaaagaagcccgtgcgctggtcagtattttccttaacgatcagttcgtgaaa
ggcaaagccaggaaactggcgcaagacagtgaaaaaccgaagcaggccgccgtattgggc
gcaggtattatgggcggcgggatcgcttatcagtctgcgctgaaaggcgtgccggttgtg
atgaaagacatcaacgaccagtccctgacgctcggcatgaacgaagcggccaaattgctg
aacaagcaactggagcgcggcaagctcgacggtctgaaaatggccaaagtgctctccacc
attcatccgacactggattacagcggcatcgaacgtgcttcagtcgtcgttgaagccgta
gtagaaaatccaaaagtcaaagccgcagtgctggcagaagcagaatccttgctcggcgcc
gataccattctggcctcgaatacctcgaccattcctatcgatcagctggcttcttcgctg
aaacgtccggaaaacttctgcggcatgcatttcttcaacccggttcatcgtatgccgctg
gtcgaaatcgtgcgcggcgagaaaacttcagacaaaaccatttcgcgtatcgtttcttac
gcactggctatgggcaaaacccccattgtggtgaatgactgcccgggtttctttgttaac
cgcgtgctgttcccgtatttctccggtttcagtttgctgttgcgagatggcgctgatttc
cgccagatcgacaaagtgatggaaaaacagttcggctggccgatgggcccggcctatctg
ctcgacgtggtcggtatcgacaccgctcaccacgcacaggccgtcatggccgccggtttc
ccgcagcgcatgacccgcgattatcgcgatgcggtagatgtcctgttcgacaaccggcgc
ttcggtcagaaaaaccagctcggcttctaccgctacagcgaagacagcaaaggcaaaccg
cgcaaggaagtcgatgaacaggcgatcagcctgctggccgataacctgaaaccggctcac
gctgacttctcaccgcaggacatcatcgcccgcatgatgatcccgatgattaatgaagtg
gtacgttgctttgaggaaggcatcattgccagcccggcggaagccgatatggcactggtg
tacggcatcggattccctccgttccacggcggcccgttccgttacctcgataccctcggc
accgccaaatatctgaaaatgaccgaacagtacgcacatctggggccgatgtatcaggca
ccagaagggttacgcgccaaagcgcaaaccaatgaaagttactatccggttgcagctccg
ctggaaaatctcagcaccggcaatcaggcataa
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