Rahnella bonaserana: QNM34_21475
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Entry
QNM34_21475 CDS
T09076
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNM34_21475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbon03019
]
QNM34_21475 (recQ)
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_21475 (recQ)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNM34_21475 (recQ)
Messenger RNA biogenesis [BR:
rbon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNM34_21475 (recQ)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QNM34_21475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WHZ40532
LinkDB
All DBs
Position
complement(4694647..4696479)
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AA seq
610 aa
AA seq
DB search
MSTAAVINKEELAHQVLRDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQLDVMAGCRAGRIKMLY
IAPERLMMGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNETRARVQEGFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ
QDVERHKLNAMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKAL
SVIARVGQRFGLGYVVEVLRGSNNQRIREYGHEKLSVYGIGKEHSNEHWTSVVRQLIHLG
LVMQNIAMHSALQLTESARPVLRGEIPLQLAVPRIQTLKIKSSASQKTYGGNYDRKLFAK
LRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPVSASDLLDITGVGQRKLEKFGRPFMAM
IRDHIDNGDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggcagtgataaacaaagaagagctggctcatcaggtattacgcgatacc
ttcggttatcagcaattcagaccaggccagcaaactatcatcaacaccgccatttcaggc
cgggattgtctggtagtgatgccaacaggcggcggtaaatcgctgtgctatcaaatcccc
gcactggtgatggacggtctgacgctggtcgtttcgccgcttatttccctgatgaaagat
caggtcgatcagctgatggcggcgggcgttgaagccggttgcctgaactcgacacaaacc
cgtgagcaacagctggacgtgatggccggttgtcgcgcggggcgtatcaaaatgctgtat
atcgcgccggaacgcctgatgatgggcgatttcctcgaacagctacaacagtggaatccg
gcgatgcttgccgtcgatgaagcccactgtatttcccaatggggccacgatttccgtcct
gaatatcgcgccctcggccagctgaagctgcgctatccgcaattgccggtgattgcgctg
accgctaccgctgatgaagccacacgtaatgatattgtccgtctgctggaactgaatgac
ccgctgattcaggtcagcagttttgaccgtccgaatatccgttacacgctggtagaaaaa
tttaagccgctcgatcagttgatccgctttgtgcaggatcagcgcggcaaaagtggcatc
atttactgtaacagccgcgccaaagtcgaagacaccgcagcacgactgcaaagccgcggg
ctgagcgttggcgcttatcacgcagggctggataacgaaacccgtgcccgcgtacaggaa
ggttttcagcgcgacgacctgcaaattgtggtcgccaccgtcgccttcggtatgggtatc
aacaagcctaacgtgcgttttgtggtgcacttcgatattccgcgcaccattgagtcttat
tatcaggaaacggggcgtgccggacgtgacggcctgcctgcggaagccgtactgctttac
gatccagccgatatggcctggttgcgccgctgtctggaagaaaaaccggctggcgcccag
caggatgttgaacgccataaactgaatgccatgaacgcattcgcagaggcacagacctgc
cgccgtctggtgctgctcaattactttggtgaaggtaaacagaacgcttgcggtaactgc
gacgtgtgtctggatccaccaaaacgctacgatggcttgctggacgcgcagaaagcgttg
tccgttatcgcacgcgtcggccagcgttttggtctgggttatgtagtcgaagtattgcgc
ggctcgaacaatcagcgtatccgcgaatacggccacgagaagctgtcggtttacggtatc
ggcaaagagcacagtaacgagcactggaccagcgtggttcgccagctgatccacctcggc
cttgtgatgcaaaacatcgccatgcactccgcgttacaactgaccgaatcggcgcgtccg
gtgctgcgtggtgaaattccgttacagctggcggtgccgcgtattcagacgctcaaaatt
aaaagcagtgccagccagaaaacatacggcgggaattatgaccgtaagttgtttgctaaa
ttgcgtaaactgcgtaagtcactggcggatgacaataatgtgccgccgtacgtggtattt
aacgacacgacgctgctggaaatggctgaacatctgccggtcagcgcgagcgatttgctg
gacatcaccggtgtcggtcagcgtaagctggagaaattcggcaggccatttatggcgatg
atccgcgatcatatcgataacggcgacgaataa
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