Rahnella bonaserana: QNM34_21530
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Entry
QNM34_21530 CDS
T09076
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00300
Lysine biosynthesis
rbon00470
D-Amino acid metabolism
rbon01100
Metabolic pathways
rbon01110
Biosynthesis of secondary metabolites
rbon01120
Microbial metabolism in diverse environments
rbon01230
Biosynthesis of amino acids
Module
rbon_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QNM34_21530 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QNM34_21530 (dapF)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QNM34_21530 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WHZ40542
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Position
complement(4706780..4707604)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHRGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRIKGLTNKRDIRVSTQTGRMVLTVTEDEDVQVNMGE
PVFEPQQVPFRAAKPEKTYILRAEERTVFCGVVSMGNPHCVLQVEDVLTAEVDLLGPMLE
SHERFPERVNVGFMQILSPESVKLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVQV
ELPGGSLEIRWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggcctgggaaacgattttatggtcgttgatgccgtcact
caaaatgtctacttctcgcctgagttgatccgccgtttgtccgatcgtcaccgtggcgtg
ggttttgaccaactgctggtggtagagccaccttatgaccccgaattagattttcactac
cgcattttcaatgccgacggcagcgaagtggcgcagtgtggcaacggcgcgcgttgcttt
gcccgctttgtccgcattaaaggtctgactaacaaacgcgacattcgcgtcagtacgcag
accggtcgcatggtgctgacggtaacggaagatgaagacgttcaggtcaacatgggcgag
ccggtgttcgagccgcaacaggttcctttccgtgcagcgaaaccggaaaagacctatatt
ctgcgtgcagaagagcgcacagtattttgcggcgtcgtgtcgatgggaaacccgcactgc
gtattgcaggtcgaggatgtattaacggctgaagtcgacctcctcgggccaatgctggaa
agccatgagcgttttcccgagcgtgtgaacgtcgggtttatgcagatcctcagtccggaa
agcgttaaattacgcgtgtacgaacggggtgcaggtgaaacacaggcgtgcggaagtggt
gcctgtgccgccgtcgctgtaggtatccagcaagggttacttgctgaagaagttcaggtg
gaactgccgggaggcagcctcgaaattcgctggaaagggccgggtcatccgttgtatatg
accggacctgccactcatgtttacgacggatttattcatctatga
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