Rahnella bonaserana: QNM34_21650
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Entry
QNM34_21650 CDS
T09076
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNM34_21650 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbon03019
]
QNM34_21650 (rhlB)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNM34_21650 (rhlB)
Messenger RNA biogenesis [BR:
rbon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNM34_21650 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WHZ40561
LinkDB
All DBs
Position
4731208..4732500
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AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLAVEALEKKGFHYCTPIQALALPITLAGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAAEGRQTNQPRALIMAPTRELAVQIHSDAEALSESTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHIDLSAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPANQRLNMLFSATLSYRVKELAFENMNNAESIEIEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVPQKKRLRVLE
DFTKGTLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGLSGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPPAKRLARSRTGNGPRRNSNSSSRRSS
APRSNRKRPG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctggca
gtagaagcccttgaaaagaaagggttccattactgcacgcctattcaggcattggcattg
ccgatcacgctcgctgggcgtgatgttgcaggtcaggcgcaaaccggtaccggcaagacg
ctggcttttctagcgtctactttccattatctgctttctcaccctgctgcggaaggtcgt
cagactaaccagccgcgtgccttgatcatggcacctacgcgtgaactcgcggtgcagatc
cactccgacgccgaagcattatctgaatctaccggactgaaattaggtctggcctatggc
ggcgacggttacgacaaacagcttaaagtgctggaaagcggcgtggacatcctgatcgga
accactggccgtttaatcgattacaccaaacagaaccacatcgacctgagtgcgattcag
gtggtggtgctggatgaagcagaccgcatgttcgatctgggcttcatcaaagatatccgc
tggttgttccgccggatgccgcctgccaatcaacgcctgaacatgctgttctcagcaacg
ctttcctatcgtgtgaaagaactggcgttcgaaaacatgaacaatgccgagtcgattgaa
atcgaaccggaacaaaaaaccggtcaccgtattcaggaagagctgttctatccttcaaac
gaagaaaagatgcgcctgttacagacgctgattgaagaagaatggccagaccgctgcatt
atcttcgcgaacaccaaacatcgctgtgaagacgtctggggccatctggctgccgatggt
catcgcgttggcttgctgaccggtgacgttccgcagaaaaaacgtctgcgcgttctggaa
gatttcaccaaaggcacgctggatattctggttgcgactgacgttgctgcccgtggtttg
cacattcctgccgtgacgcacgtctttaactatgacctgcctgacgactgtgaagactac
gttcaccgcattggccgtaccggtcgcgcgggcctgagcggtcattccatcagccttgcc
tgtgaagaatatgccctgaatctgccggcgattgaaacgtacaccggccacagcattccg
gtcagtaaatacaacagcgatgcgctgttaacggatttgcctcctgcaaaacgtcttgcc
cgctcgcgtaccggtaacggcccgcgtcgtaacagcaattcgtcttcacgtcgcagcagt
gcgccacgtagcaaccgtaaacgtccgggctga
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