Rahnella bonaserana: QNM34_21915
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Entry
QNM34_21915 CDS
T09076
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rbon
Rahnella bonaserana
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbon03000
]
QNM34_21915 (cytR)
Transcription factors [BR:
rbon03000
]
Prokaryotic type
Helix-turn-helix
LacI family
QNM34_21915 (cytR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
TetR_N
MarR_2
AIRS
HTH_Crp_2
HTH_24
HTH_10
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
WHZ40605
LinkDB
All DBs
Position
4794916..4795944
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AA seq
342 aa
AA seq
DB search
MEHKKELPAATMKDVAEQAGVSTATVSRALMNPEKVSASTRQKVDQAVMAVGYSPHALSR
NLKRNESRTILVIVPDICDPFFSDLIQGIERTAAESGYLVLIGDCAQQNQQEKTFINLII
TKQIDGMLLLGSDLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLL
KLGHQRIACIAGPKHMPLCQYRSQGYVQALRRNGLSVEKQLTVDGDFSYESGAQAVTELM
SLPVPPTAIFCHNDIMAIGAMFQAKKMGLRIPEDLSVVGFDDIKASQYTDPPLTTVAQPR
FQLGRQAMLLLLEQLQGNQVQSGSLLLDSELIVRESTAAPKA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggagcacaagaaagaattacccgccgcgacaatgaaagatgtggctgaacaggcaggc
gtttcaacagcaacggtatcccgcgcgttaatgaatccggagaaagtctccgcctcaacc
cgtcagaaggttgatcaggccgtcatggctgtgggttattctcctcacgccctgtcccgc
aacctgaaacgtaacgaatcgcgtacgattttagtgatcgtcccggacatctgcgatcca
tttttttccgacctgatccaggggatcgaacgcacggcggctgaaagcggttatctggtg
ctcatcggcgattgcgcccaacagaatcagcaagaaaaaacctttatcaatctgattatc
accaagcaaattgacggcatgctgctgctcggctccgatttaccttttgacgccagcaag
gaagaacagcgcaatttgccaccgatggtgatggctaacgaatttgcgccagaactggaa
ctgccaacggtacacattgataacctgaccgccgcatttgaagccgtacattatcttctc
aagctgggacatcagcgcattgcctgcatcgccgggccgaaacatatgccgctgtgccag
tatcgttcacaaggctatgtgcaggcactgcgccgtaacgggctcagcgtcgaaaaacag
ctgaccgtcgacggcgattttagctatgaatccggggcacaggcagttaccgaactgatg
tcactgccagtgccgcctacggcgattttctgtcataacgatattatggcgattggtgca
atgttccaggcgaaaaaaatgggtctgcgcatcccggaggatctgtcggttgtcggcttc
gatgacattaaggccagccagtataccgaccctccgctgaccaccgtcgcgcagccaaga
ttccagcttggtcgtcaggccatgttattattgcttgagcagttacagggaaatcaggta
caaagcggttcattactgctcgacagcgaactgatcgtgcgtgaaagcaccgcagccccc
aaagcgtaa
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