Rahnella bonaserana: QNM34_22080
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Entry
QNM34_22080 CDS
T09076
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon00541
Biosynthesis of various nucleotide sugars
rbon01100
Metabolic pathways
rbon01250
Biosynthesis of nucleotide sugars
Module
rbon_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QNM34_22080 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rbon01005
]
QNM34_22080 (rfaD)
Enzymes [BR:
rbon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QNM34_22080 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rbon01005
]
Core region
QNM34_22080 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
WHZ40637
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All DBs
Position
4827715..4828647
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIIKSLNDMGYRDILVVDNLKDGTKFVNLVDLDIADYCDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHYCLDRSIPFLYASSAATY
GSQSTSFVEDRKYEQPLNVYGYSKFLFDQYVREILPHAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSEGFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRS
ESFQAVADAVVAYHKSGDIEYIPFPEKLKGRYQSFTQADMTALRNAGYDKPFKTVAEGVT
EYMSWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtcactggcggcgctggttttatcggcagcaatattattaaatcgctcaat
gatatgggataccgcgatattctggtggttgataacctgaaagacggcaccaaattcgtc
aatctggttgatctggatattgcggattattgtgataaagaagatttcattgccagtatc
gttgcaggcgacgatttaggtgatattgacgccattttccacgaaggcgcctgttcgtcc
actaccgagtgggacggcaaatacatgatggataacaactatcagtactctaaagatatc
ctgcattattgcctggatcgcagcattcctttcctttacgcctcttccgccgccacttac
ggcagccagagcaccagctttgttgaagatcgtaaatatgagcaaccgctgaacgtctac
ggctattctaagttcctgtttgaccagtatgtccgcgaaattctgccacatgcggaatct
cagatttgcggtttccgttacttcaacgtctacggaccacgcgaaggtcataaaggcagc
atggccagcgtcgcattccacctcaacaaccagatcaatgccggtgagaacccgaaattg
ttctccggcagcgaaggcttcaaacgcgatttcatctacgtgggcgatgtggctgcagtg
aacctgtggttctggcagaacggcgtttccggtattttcaactgcggtaccggccgctca
gaatccttccaggctgtggcagacgcggtagtggcgtaccacaaatctggcgatatcgaa
tacattcctttcccggaaaaactgaaaggccgttatcagtccttcactcaggccgatatg
accgcgctgcgtaatgccggttatgacaaacctttcaaaacggttgctgaaggcgtgacg
gaatacatgagctggcttaaccgcacagtttaa
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