Rahnella bonaserana: QNM34_22140
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Entry
QNM34_22140 CDS
T09076
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rbon
Rahnella bonaserana
Pathway
rbon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNM34_22140 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbon03400
]
QNM34_22140 (mutM)
Enzymes [BR:
rbon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QNM34_22140 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNM34_22140 (mutM)
DNA repair and recombination proteins [BR:
rbon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNM34_22140 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
HVO_2753_ZBP
DUF7573
zf-dskA_traR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WHZ40649
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All DBs
Position
complement(4840201..4841010)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPYLKGHTILHAVVRNPRLRWPVSAEILALSDQPVLSVQRRAKYLL
VELKTGWIIIHLGMSGSLRVLPEETEPGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSSDL
AASNVLAHLGPEPLSEDFTADYLFEKCRTKKSPIKPWLMDNKLVVGVGNIYASESLFVAG
ISPDRPAHSLKRDEAELLVRTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRA
GEPCRACGTPIESKKHAQRTTFFCPNCQR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacctgaggttgaaaccagccgcagagggattgaaccctatctgaaaggt
cacaccatactccatgctgtcgtacgcaatccgcgtttacgctggcctgtctcggcggag
atcttagcgttaagcgatcagcctgttctgagtgttcagcgccgcgcaaaatatcttctg
gtggagctgaaaaccggctggattatcattcatctgggcatgtctggcagcctgcgggta
ttgccggaagaaacagagccgggcaaacatgatcacgtcgatctggtcatggataccggc
catgtgctgcgttataccgatccgcgccgttttggcgcctggttatggtcttctgatctg
gcagccagcaatgtcctggcccatctcggccctgaaccgctgagcgaagatttcacggcg
gattacctgtttgagaaatgccgcacgaagaaatcaccgatcaaaccctggctgatggac
aacaaactggtggtcggcgtggggaatatctatgccagcgaatccttgtttgttgccggc
atttcacctgacagacccgcccattcgctcaaacgtgatgaagcggagttgctggtcaga
accatcaaagcagtattattgcgttctattgaacagggcgggacgacgctgaaggacttt
ttacagtcagacggaaaaccgggatatttcgcgcaggaattgcaagtctatggaagggct
ggtgagccttgccgggcatgtggtacgcccattgagagtaagaaacacgctcagcgcacc
acgtttttctgcccgaactgccagcgctaa
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