Ruminococcaceae bacterium CPB6: B6259_00055
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Entry
B6259_00055 CDS
T04880
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbp03032
]
B6259_00055
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_00055
Enzymes [BR:
rbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B6259_00055
DNA replication proteins [BR:
rbp03032
]
Prokaryotic type
DNA Topoisomerases
B6259_00055
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B6259_00055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
ARP49420
UniProt:
A0A1W6WAZ1
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All DBs
Position
8340..10904
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AA seq
854 aa
AA seq
DB search
MDEIQNENKSKIIDVDLEKEVQKSFMAYSMSVIVQRALPDVRDGLKPVHRRILYAMYEDG
ITPDKPYKKCATTVGDVLGRYHPHGDASVYDALVRLAQDFSMRYMLVDGHGNFGSVDGDP
PAAYRYTESRMSRLSVEMLRDIDKNTVDFGSNFDDSRKEPTVLPGHFPNLLVNGSTGIAV
GMATNIPPHNMGEVLDGVCALIDDPDIGLEGLMQYIKGPDFPTAGIIMGRAGIRAAYATG
RGRITVRARAEIVEEKNGRFSIVVTELPYQVNKARLIENMADLVKNKRITGISNIEDHSD
RNGMHILITLKRDASPQIILNQLYSYTQLQTTFSVNMLAIVGAHGSYSGEPKLLTLKQIL
QEYVAFQKDVITRRTKYDLKKALARAHILEGLKIAVDNIDEIIAIIRSSRDRAAARARMT
ERFGLDDIQTQAIVQMPLGALTGLERKKLEEELAAIEAKVADLRDILAHEERVLAIIKED
AQNVKKKFGDERRTEIVSVSGEVDIEDLIPDEECVLTLTNFGYAKRLAADTYHTQNRGGR
GISAMTRRDEDFASEMFVCGSHDYVLFFTNFGRVYRLKCYEVPEGSRTSKGVNIANLLPI
SQGESVTSMIRVPEFDDESYLCMVTRNGIIKRTALSAYNTARKGGVIALGLDDGDELCWV
RLTSGDDELLVATHFGMAIRFNENDVRPMGRAARGVKAITLKESDYVVGMSILREGGRVL
TVSETGFGRLSPIEDYRIQNRGGKGLTNYHIDKYGCVAGIKVVDLTDDIILISEDGILIR
IPADSIRICSRPSKGVKVMRLNGTDKVVTLARTEHEEDVQMDELPDNGDNDDETEGADDS
AETEDQQPEEQEEN
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatacaaaatgaaaataaatcaaaaattatcgatgtagacctggaaaaggaa
gtacaaaaatcctttatggcatattctatgtcggtcattgtacagcgtgcattaccggat
gtacgggacgggctgaagcctgtccaccgccggattctgtacgccatgtatgaggacggc
attacaccggataagccctataaaaaatgtgcaaccaccgtcggcgacgtgctgggccgg
tatcatccgcacggcgacgcctctgtgtatgacgcgctggtacgtttggcacaggatttt
tccatgcgctatatgctggtagacggccacggcaactttggctccgtggacggtgacccg
ccggctgcttaccgttatacagaatcccgcatgagccgcctgtccgtagaaatgctgcgc
gatattgataagaatacggtcgattttggttcgaactttgatgacagccgcaaggaaccc
acggtactgcccggccattttccaaacttgctggtcaacggctccacgggtattgcggtc
ggtatggcaaccaatattccaccgcacaatatgggagaagttctggacggcgtctgtgcc
cttattgacgatccggatatcggcctggaaggtctgatgcagtacattaagggaccagat
ttcccgacagccggtatcattatgggccgtgcgggtatccgtgccgcttatgcaaccgga
cgcggccgcatcacggtgcgtgcccgcgcggaaattgtggaggagaaaaacggccgcttc
agcattgttgttacggaactgccctatcaggtcaacaaagcacgcctgattgaaaacatg
gcggaccttgttaaaaacaagcgcattactggcatttccaacattgaggaccattcagac
cgcaacggcatgcatattcttattacgctcaagcgggacgcttcccctcagattatcctg
aaccagctgtattcttacacccagctgcagacaaccttcagcgtcaatatgctggcgatt
gtcggtgcacatggcagctacagcggcgagccaaaactgctgaccttaaagcagattttg
caggaatatgtggcctttcagaaggacgtcattacacgccggacaaagtatgacttgaaa
aaggcactggcccgtgcgcatattctggaaggattaaaaattgccgtcgataatatcgat
gagattattgccattatccgttccagccgtgaccgtgctgcggcgcgtgcgcgtatgacg
gaacgttttgggttggacgatatacaaacacaggccattgtgcagatgcctttgggtgcc
ctgaccggtttggaacgcaaaaaactggaagaagaactggctgccatagaggcaaaagtg
gcggacctgcgcgatattttggcacacgaggagcgtgtccttgctatcattaaggaagac
gcgcagaatgtcaagaaaaagttcggcgatgaacgccgcaccgaaattgtttctgtttcc
ggtgaagtggatattgaggacctgattccagacgaggaatgtgtgctgacactgacgaac
ttcggttatgccaagcgtctggcggcggatacctatcacacacagaaccgcggcggacgg
ggcatcagtgctatgacacgtcgggatgaggattttgccagtgagatgtttgtgtgcggc
agccatgattatgttttgttctttaccaattttggccgtgtgtaccgtctgaagtgctat
gaagtgccggagggcagccgtaccagcaagggtgtcaatattgccaacctgctgccgatt
tcacagggcgaaagtgtcacctccatgattcgtgtgccggagtttgacgatgaaagttat
ctgtgtatggttacccgcaatggcattattaagcgcacagcgctgtccgcgtataatacg
gcgcggaagggcggcgtgattgcgctgggtttggacgacggtgacgagctgtgctgggtg
cgtctgacaagcggcgatgatgagctgctggttgctacccattttggtatggccattcgg
tttaatgaaaatgatgtgcgtccaatgggccgtgcggcgcgcggtgttaaggcgattacc
ctgaaagaaagcgactacgttgtcggcatgagtatcctgcgggaaggcggccgtgtgctg
acagtcagtgaaactggctttggccgtctgtcaccgattgaagattaccgcattcaaaac
cgtggcggcaagggtcttacgaactaccatattgataaatatggctgtgtggccggcatt
aaagttgtggacctgacagacgatattattttaatttcggaggacggcattcttatccgt
attccggcagattccattcgtatttgttcccgtccgagcaagggtgtcaaagtaatgcgg
ctgaacggcaccgacaaagttgtcacgcttgcccgtacagagcatgaggaagacgtgcaa
atggacgaactgccggacaacggtgacaatgacgatgaaacggaaggcgctgacgattca
gctgaaacggaagaccagcagcctgaagagcaggaagaaaactga
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