KEGG   Ruminococcaceae bacterium CPB6: B6259_01605
Entry
B6259_01605       CDS       T04880                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
rbp  Ruminococcaceae bacterium CPB6
Pathway
rbp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rbp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B6259_01605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbp03019]
    B6259_01605
Messenger RNA biogenesis [BR:rbp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B6259_01605
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_2 KH_KhpA-B KH-I_KHDC4-BBP Ribosomal_S18 ATG14
Other DBs
NCBI-ProteinID: ARP49698
UniProt: A0A1W6WCK6
LinkDB
Position
complement(331632..333188)
AA seq 518 aa
MNPILVTVILCIVCVAAGIAAGFFAGERYRKHTAELAIGSAEEEAKRIVNDAIKSAEGKK
KEAVLEGKDELHRMRSEADREINDRRKEIQRQERRAQQKEENLDRKLESLENKEDKLTKK
NKQAEDRLNEAEDIKKQQLEKLERISGFTAEQAKEYLLNHFESELMHEKAVKLRDIEQQT
KDEADSTAREVISMAIQRCAADHVSEATISVVPLPNDEMKGRIIGREGRNIRTIETLTGV
DLIIDDTPEAITISSFDPVRREVARIALEKLIADGRIHPARIEETVEKARREVDTSIKQA
GENAVLQTGITGIHPELIKLLGRLRYRTSYGQNVLEHSLEVASLAGIMASELGLDPTMAR
RAGLLHDIGKALDHEMEGSHVDIGVNVARKYKESEAVVHAIAAHHNDIEPKTVIACLVQA
ADAISAARPGARRENAENYIKRLEKLEEVASSFEGVERCYAIQAGREIRVIVKPEAISDD
QMTMLAHDICKKIEADLEYPGQIKVNIIRESRAVDYAK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgaatccgatcttagtaacagttatcctttgcattgtctgtgtggctgcaggcattgct
gcgggattttttgcgggagaacgctaccgcaaacataccgccgagcttgccatcggctcc
gccgaggaggaagcaaagcggattgtcaacgacgcgattaaatccgcagagggaaagaaa
aaagaagccgtactggaagggaaagacgaactgcaccgcatgcgcagcgaagccgaccgt
gaaattaacgaccggcgcaaggaaattcagcgacaggaacgccgtgcgcagcagaaagaa
gaaaacctggacagaaagcttgaatccctggaaaataaagaggataagctgaccaaaaag
aacaagcaggcggaggaccgcctgaatgaagcagaggacattaaaaagcagcagttggaa
aagctggagcgtatctccggctttacggccgagcaggcaaaggaatacctgctgaaccac
tttgagtccgagctaatgcacgaaaaagccgttaagctgcgtgacattgagcagcagaca
aaggacgaagcggacagcactgcccgcgaagtcatctccatggctatccagcgctgcgca
gcagaccacgtttccgaagcaactatttcggttgttccgctgccgaacgatgagatgaaa
ggccgcattatcggccgtgagggccgcaacatccgtacaatcgaaacactgacaggtgtt
gaccttatcattgacgatacaccggaagccattaccatttccagctttgacccggttcgc
cgtgaggtagcccgcatcgcgctggagaaactgattgctgacgggcgcattcacccggca
cgcattgaagaaacggttgaaaaagcccgccgtgaagtagatacttccattaaacaagct
ggtgaaaatgctgtcctacagacaggcatcaccggtattcatccagagcttatcaagctg
ctcggccgcctgcgctaccgcacaagttacggccaaaacgtactggaacattccctggaa
gtggcttctcttgccggcattatggcttccgagctggggctagacccaaccatggcacgc
cgtgccggtctgctgcatgatatcggcaaagcgcttgaccatgaaatggaaggctcccat
gtagacatcggtgtaaacgtggcccgtaagtacaaagaaagcgaagcggtcgttcacgca
attgccgcccaccataacgacattgagccaaagaccgttattgcctgtttggtacaggct
gctgatgccatcagcgccgctcgtccgggtgcgcgccgtgaaaatgcagaaaactacatt
aagcgtttggaaaagctggaggaagttgcatcttccttcgaaggtgttgaacgctgctat
gcgattcaggccggccgtgaaatccgtgtcattgtaaaaccggaagctatttcggacgac
caaatgaccatgctggcacacgacatctgcaaaaagattgaggctgacctggaatatccg
ggccaaattaaagtgaacatcatccgcgaaagccgcgctgtcgactacgcgaaataa

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