Ruminococcaceae bacterium CPB6: B6259_02430
Help
Entry
B6259_02430 CDS
T04880
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6259_02430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_02430
Enzymes [BR:
rbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B6259_02430
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6259_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
PIF1
HHH_5
T2SSE
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
UvrD_C
nSTAND3
NPHP3_N
TrwB_AAD_bind
SRP54
DEAD
ABC_tran
AAA_29
NTPase_1
AAA_28
AAA
RsgA_GTPase
MeaB
AAA_16
SLFN-g3_helicase
PhoH
HerA_C
ResIII
Thymidylate_kin
CbiA
Zeta_toxin
Mg_chelatase
MobB
TsaE
AAA_5
nSTAND_NTPase5
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ARP49850
LinkDB
All DBs
Position
506492..508714
Genome browser
AA seq
740 aa
AA seq
DB search
MEAQTLLEMTGTVEHITFRNECNGYTVLELNNGEELVTVVGSMPTAEPGDELHVVGQWTE
HPSFGRQFSASIYERMPPATTESILLYLSSGAVRGIGRAMAKKIVSIFGSQSLQIMEREP
LRLAEISGISQRKAEQIGQEYRKKLGIREVILGLKEFGMKPEESVRIYRTFGPDSVSQVR
SDPYCLCEDDVGLSFQRADGIAETLEHPADDPCRVRAGILYVLQHNVNNGHTCLPKEKLL
PTAARMLGLPQELLDEVFSQMVQEGSVIICTIQDRTAAYLPRLYRAEVFAAQRLQMMMDY
PSQPIPDAQQAVEEFESKIGISYADEQKEAIITALTHGMLVLTGGPGTGKTTTLNAIIRI
LQAKGEKVLLAAPTGRAAKRMSELTGEEAKTLHRLLQVEWDETDSPTFARNEQKPLECDA
LIVDELSMVDISLFEALLRALPMGCRLVLVGDCDQLPSVGPGNVLGDLIASGMLPVVQLQ
RIFRQSMQSLIVTNAHRILAGEMPVLNDCTHDFFFMQRSQPEQIAQTIRDLCAVRLPASY
DLSPMTDIQVLSPTRKTQLGTVQLNTLLQNALNPREHGKKEIKINGRLFREGDKVMQTRN
NYTLTWEKEDGSEGEGVFNGDIGILRQVDRGGSTITVDMDGRIVSYELETATDLELAYAL
TVHKSQGSEFPAVIMPMYPGPRPLYYRNLFYTAITRARKLLILVGTQRTVQMMVSNDRRM
RRYSGLRDFLTGEAVPNDAS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcagacgctgctggaaatgacgggtacggttgaacatattacgtttcgcaat
gagtgcaacgggtacaccgtactggaactgaacaacggggaagagctggtgacagtggtc
ggttccatgcctacagcggagccgggagatgagcttcatgtagtgggacagtggacggag
cacccctcctttggcaggcagttcagtgccagcatttatgagcgaatgccgcccgcgaca
accgagtccattctgctgtacctttcgtccggtgcggtacgcggaattgggcgggcgatg
gcaaaaaaaattgtcagcatctttggcagtcagtccctgcagattatggaacgggaaccg
ctgcggctggctgaaatcagtggcatttcgcagcgaaaggcggaacaaatcgggcaggag
taccgaaaaaagcttggcattcgtgaggtgattctgggcctgaaagaatttggcatgaaa
ccggaggaatctgtacggatttaccgcacgttcggtccagattctgtttctcaggtacgc
agtgacccgtactgcctgtgtgaagacgacgtgggcctcagctttcagcgtgcggatggc
attgctgaaacgctggagcatccagctgacgacccatgtcgtgtgcgcgcaggcattttg
tatgttctgcagcataatgtaaacaatggacatacctgtctgccaaaagaaaaactgctg
ccgaccgccgcgcgtatgcttggcctgccgcaggagctgctggatgaggtcttttcacaa
atggtacaggagggcagcgtcattatctgtaccatacaggaccgtactgccgcttatctg
ccgcggttgtaccgggcggaagtgtttgcggcacagcggctgcagatgatgatggattac
ccctcacagccgattcccgatgcacagcaggcagtggaggagttcgaaagcaaaatcggc
atttcctatgcagatgaacagaaagaagctattattaccgctttgacgcacggtatgctg
gtcttgaccggcgggccgggcacaggcaaaacgaccaccctgaatgcaattattcgtatt
ctgcaggcaaaaggggaaaaggtcctgctggcggcaccgaccggccgtgcggctaagcga
atgagcgagctgacaggagaagaggccaaaacactgcaccgtttgctgcaggtggagtgg
gacgaaacagacagcccgacttttgcccgcaatgaacagaaaccgctggagtgcgatgca
ctgattgttgacgaactttctatggtggatatttccttgttcgaggcattgctgcgggcg
ctgcccatgggctgccggctggtgctggtaggcgactgtgaccagctgcccagtgtcggg
ccaggcaatgtattgggggatctgattgcttccggaatgctgccggtggtgcagctgcag
cgcatcttccgtcaatccatgcaaagtttaattgtaaccaacgcacaccgcattttggcc
ggtgaaatgccggtacttaatgattgtacccacgactttttctttatgcagcgctcccag
ccggaacagattgcgcagaccattcgggacttgtgtgcggtgcgtctgccggcaagctat
gatttgtcgccaatgacggatattcaggtactttcgccgacaaggaaaacccagctgggc
acagtacagctcaatacgctgctgcaaaatgccctcaatccgcgcgaacacggaaagaaa
gaaatcaagataaacggccgtctgttccgcgagggcgataaagttatgcagacgagaaac
aactatacactgacatgggaaaaagaggacggctccgagggggaaggcgtctttaatgga
gacattggtattttaaggcaagttgaccgcggcggttccacaatcactgtggatatggac
ggccgcattgtttcttatgaattggaaacggcgacagatttggagcttgcttatgcactg
acggtccataaaagtcagggcagtgagttcccggcagtcatcatgcccatgtaccccggc
ccgcggccgctgtattaccgcaacttattttatacagcgattacccgtgcacgcaaactg
ttgattttggttggcacccagcgcacagtgcagatgatggtgagcaacgaccgccgtatg
cgccgctactctggtctgcgcgatttcctgacgggagaggctgttcccaatgatgcatcc
tga
DBGET
integrated database retrieval system
