Ruminococcaceae bacterium CPB6: B6259_02775
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Entry
B6259_02775 CDS
T04880
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6259_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_02775
Enzymes [BR:
rbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B6259_02775
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6259_02775
RecFOR pathway proteins
B6259_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
AAA_16
nSTAND3
TIP49
AAA_14
AAA_22
AAA_3
TsaE
RNA_helicase
NB-ARC
AAA_24
NTPase_1
AAA_18
Sigma54_activ_2
Rad17
IstB_IS21
AAA_17
NPHP3_N
AAA_28
NACHT
Resolvase
Parvo_NS1
ABC_tran
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARP49907
UniProt:
A0A1W6WC99
LinkDB
All DBs
Position
573583..574641
Genome browser
AA seq
352 aa
AA seq
DB search
MEYKEDDFDLENRMVAPEYSPDDEETENPLRPRHLADYIGQEKVKSNLAVFIEAALQRQE
TLDHVLLYGPPGLGKTTLAGIIANELGVNLRVTSGPAIERPGDLAAILTNLNQGDVLFID
EVHRLPRTVEEILYPAMEDYSIDIITGKGQMAASYHLPLPKFTLVGATTRAGQLSAPLRD
RFGVVLRLEMYSPQELAQIVTRSAKILGIAIDADGALEIASRSRGTPRIANRMLKRVRDF
AQVSSDDGVINYNTAKLGLDRMEVDELGLDANDRRLLTTMIRYYNGGPVGLETLAAAIGE
EAVTLEDVYEPYLMQIGFLARTPRGRVATKAAYCHLGLKPPGEDVPQQQKIY
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggagtacaaggaagacgactttgatttggagaaccgaatggtcgcaccggaatattca
ccggacgatgaagaaacggaaaatccgctgcggccgcgccacctggcggattatatcggg
caggaaaaggtgaagtccaacctcgctgtctttatagaagcggccctccagcggcaggaa
acgctggatcatgtactgctttacgggccaccgggactgggcaaaacaacgcttgcaggt
attattgcaaacgagctgggagtaaacctgcgggtcacttccggtccagccattgaacgg
cccggcgatttggcggcgattctgacaaacctgaaccagggggatgtactgtttattgat
gaggtgcaccgcctgccgcgtaccgtagaggaaattttgtatccggcaatggaggattac
tccattgatattattaccggcaaaggacagatggcggcaagctaccacctgccgctgccg
aagtttacactagtgggtgccactacccgggcaggtcagctttccgcaccgctgcgggac
cgctttggtgtggtgctgcgtctggaaatgtattctccgcaggagttagcacaaatagtc
acacggtctgcgaaaattctgggcattgctatcgatgccgatggtgcgctggagattgcc
tcgcgcagccgcggtaccccgcgcattgccaaccgaatgctcaaacgggtacgggatttt
gcgcaggtttccagtgacgacggtgttatcaattacaataccgctaagctgggattggac
cgcatggaagtcgatgaattgggattggatgccaatgaccggcggctgctaaccacgatg
attcgttactacaacggcggaccggtcggcctggaaacgctggccgctgccattggggag
gaggcggtcaccctggaggatgtatatgagccatatctcatgcagattggttttctggca
cgcacgccgcgcggccgtgttgcgaccaaggcggcgtattgccatttgggcctgaagccg
ccgggagaggacgtcccgcagcagcagaagatttactaa
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