Ruminococcaceae bacterium CPB6: B6259_02940
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Entry
B6259_02940 CDS
T04880
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03030
DNA replication
rbp03430
Mismatch repair
rbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B6259_02940
03430 Mismatch repair
B6259_02940
03440 Homologous recombination
B6259_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbp03032
]
B6259_02940
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_02940
Enzymes [BR:
rbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B6259_02940
DNA replication proteins [BR:
rbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B6259_02940
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B6259_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ARP49934
UniProt:
A0A1W6WCS1
LinkDB
All DBs
Position
608208..609260
Genome browser
AA seq
350 aa
AA seq
DB search
MPECRESDLKKQIEANTLTGLYVLYGDEKYMVAYWAKRLIKKAAGKTFLDFNLQCFSGDA
AADALDDAVQALPFMASRKCVAVSDLSLDGRTPSENKKLLQLFADVPDTTVLVLSFAASD
PPFQKDKKWKKLYTECSKSGTCVACRKHSRPELEKTLVAAANRRGCVLQRVDAGKMVRYV
GDDLTALHGELEKVCAYTGSGPIAPKTIDLLVTRNLEARVYDLSRALLAGHSGQAYRILN
QLLEQNEPPVRILAVLTGAYVDLYRVRTALQSGESAMEPAKYFPEYKNRQFRLTNAERDA
HGLSTQRLRASLDILLAADLDLKGSHTAEQLILEKALARLLLAARGEKSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatgcagggaaagcgacctaaaaaagcagatagaagcgaacacgctaaccggg
ctgtatgtcctgtacggggacgaaaagtatatggtcgcctactgggcaaagcggctgata
aaaaaagcggcgggtaaaacgtttctggactttaatctacagtgtttttctggtgacgcc
gccgcggacgcactggacgatgcggtgcaggcgctgccgtttatggcgtcgcgcaagtgt
gtggcggtgtctgatttgtcactggacggccgcacgccgtctgaaaacaaaaagctgctg
cagctttttgcggatgtgccggacacaacggtactggttctgtcctttgcggcgagtgac
ccgccgtttcagaaggacaaaaagtggaaaaagttatatacagaatgcagtaaatccgga
acgtgcgttgcctgccggaaacacagccggccggagctggaaaaaacgctggtggcggct
gcaaaccgccgcggctgtgtgctgcagcgggtggacgcggggaagatggtgcgctatgtc
ggtgacgacctgaccgcactgcacggcgagctggaaaaagtctgtgcctacaccggcagc
ggaccgattgcgcccaaaaccattgacctattggttacgcgcaatttggaggcacgtgtg
tacgatctaagtcgtgccttgctggcgggacacagcgggcaggcgtaccggattttaaat
cagctgctggagcagaacgagccgccggttcgcattctggcggtgctgacgggtgcttat
gttgatttataccgtgtgcgtactgccttgcagagcggcgaaagcgccatggaaccagcc
aagtattttccggagtacaaaaatcgccagttccgtttgaccaatgcggagcgggacgcg
cacggtctttccacacaaaggctgcgtgccagtctggacattctgctggcggcggacctc
gacctgaaaggttcccacacggcggaacagctaattttggaaaaggcgctggcacggctg
ctgttggctgcaagaggggagaagagcgcgtga
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