Ruminococcaceae bacterium CPB6: B6259_04050
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Entry
B6259_04050 CDS
T04880
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00300
Lysine biosynthesis
rbp00470
D-Amino acid metabolism
rbp01100
Metabolic pathways
rbp01110
Biosynthesis of secondary metabolites
rbp01120
Microbial metabolism in diverse environments
rbp01230
Biosynthesis of amino acids
Module
rbp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B6259_04050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B6259_04050
Enzymes [BR:
rbp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
B6259_04050
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Motif
Pfam:
DAP_epimerase
Pro_racemase
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
ARP50122
UniProt:
A0A1W6WCX1
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All DBs
Position
814241..815074
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AA seq
277 aa
AA seq
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MKFTKMQGIGNDYIYVNCFEEQVTDPGKLSIRLSDRHFGIGSDGVILIKPSKTADCEMDM
YNADGSRGKMCGNGIRCVGKYVYDRGICRKNPLRVDTQSGIKTLYLQVENGAVQSVRVDM
GAPVLEPENIPVQLPGSHAVNVPYSVAGKEQHITCVSMGNPHCVLFVPDTDSLDLEKIGP
NFENAPIFPERVNTEFIQLISRTEIKMRVWERGSGETLACGTGACASVVACVLNDKTERR
VRLHLLGGDLVVTWDEKTGHVFLEGPAAFVFDGTVEV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttacaaagatgcagggaatcggtaatgattatatctatgtcaactgttttgag
gagcaggttacggacccgggcaaattgagcattcgcctgagtgaccgccattttggcatt
ggctctgatggtgtgattttgattaaacccagcaaaacggctgactgtgaaatggatatg
tataatgcggacggctcccgcggaaaaatgtgcggcaatgggattcggtgcgttggcaaa
tatgtttacgaccgcggcatctgccgaaaaaatccgctgcgggtagatacccaaagcggc
attaaaacactgtatctgcaggtggaaaatggtgccgttcaatccgtgcgggtggacatg
ggtgcacccgttttggagccggaaaacattccggtacagctgccgggcagccatgccgtg
aatgtgccgtactctgttgcgggaaaagaacagcatattacctgcgtttccatggggaac
ccgcattgtgtcctgtttgtgccggatacggacagcctggatctggagaaaattgggccg
aactttgaaaacgcgccgatttttccggaacgtgtcaatacagagtttatccagctcatc
agccgaacagaaatcaaaatgcgtgtttgggagcgcggctccggcgaaacactggcctgc
ggaacaggcgcatgcgcttctgttgttgcctgtgtcctcaacgataaaacagagcgccgg
gttcggctgcatctgctgggcggcgaccttgtggtcacatgggacgaaaagaccggtcat
gtttttctggaagggcctgcagcgtttgtctttgacggaacagtagaagtataa
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