Ruminococcaceae bacterium CPB6: B6259_04140
Help
Entry
B6259_04140 CDS
T04880
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00750
Vitamin B6 metabolism
rbp01100
Metabolic pathways
rbp01240
Biosynthesis of cofactors
Module
rbp_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
B6259_04140
Enzymes [BR:
rbp01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
B6259_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
TetR_C_27
IGPS
NanE
His_biosynth
DHO_dh
DUF188
Motif
Other DBs
NCBI-ProteinID:
ARP50138
LinkDB
All DBs
Position
complement(833795..834667)
Genome browser
AA seq
290 aa
AA seq
DB search
MENRYELNKDLAQMLKGGVIMDVTSPEQAKIAEQAGACAVMALERIPADIRAAGGVSRMS
DPKMIRSIQQAVSIPVMAKVRIGHFVEAQILQAIEIDFIDESEVLSPADDVYHIDKTKFQ
VPFVCGAKDLGEALRRIAEGASMIRTKGEPGTGDVVQAVRHMRKMNSEIRRIQSMREDEL
YEAAKQLEVPYRMVRSVHDNGRLPVVNFAAGGIATPADAALMMQLGAEGVFVGSGIFKSG
NPAKRASAIVKAVTNYKDPKMLAELSTDLGEAMVGINADEIALLMAERGK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccggtatgagctgaacaaagaccttgcacagatgctgaagggcggcgtcatt
atggacgttacatccccggaacaggccaaaattgcggaacaggctggtgcctgtgcggtg
atggcgctggaacgcattcctgccgatattcgggccgccggcggtgtttcccgtatgagt
gaccccaaaatgattcgcagcattcagcaggctgtgtccattcctgtgatggccaaagtg
cgtattgggcactttgtagaagcccaaattttgcaggcaattgaaatagacttcatcgat
gaaagtgaagtgctctcccctgccgatgatgtctatcatatcgacaaaacaaagtttcaa
gtcccctttgtctgcggcgcaaaggacctcggtgaagcactgcggcgcattgcggaaggt
gcttccatgattcgcaccaaaggggaacccggcacgggagatgttgtacaggccgtgcgg
catatgcggaaaatgaacagtgaaattcgccgcattcaaagtatgcgggaagatgaactg
tacgaggccgccaaacagctggaggtcccctaccgtatggtacgctcggtacacgataac
ggccgtctgcctgttgtcaactttgcggccggcggcattgcaactccggcggacgccgcg
ctgatgatgcagctgggcgctgaaggcgtatttgtcggttccggcatttttaaatccggc
aaccctgccaaacgtgcttctgctatcgtaaaagctgtgacaaattacaaggaccccaaa
atgctcgctgaactttccacggacttgggtgaagcaatggtcggcattaacgcagatgaa
attgcgctgttaatggcggaacgcggcaaataa
DBGET
integrated database retrieval system
