Ruminococcaceae bacterium CPB6: B6259_04210
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Entry
B6259_04210 CDS
T04880
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00260
Glycine, serine and threonine metabolism
rbp00460
Cyanoamino acid metabolism
rbp00630
Glyoxylate and dicarboxylate metabolism
rbp00670
One carbon pool by folate
rbp00680
Methane metabolism
rbp01100
Metabolic pathways
rbp01110
Biosynthesis of secondary metabolites
rbp01120
Microbial metabolism in diverse environments
rbp01200
Carbon metabolism
rbp01230
Biosynthesis of amino acids
rbp01240
Biosynthesis of cofactors
rbp04981
Folate transport and metabolism
Module
rbp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B6259_04210 (glyA)
09102 Energy metabolism
00680 Methane metabolism
B6259_04210 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B6259_04210 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
B6259_04210 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
B6259_04210 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
B6259_04210 (glyA)
Enzymes [BR:
rbp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
B6259_04210 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ARP50150
UniProt:
A0A1W6WD14
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All DBs
Position
847418..848671
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AA seq
417 aa
AA seq
DB search
MYKDLIDTIGFVKNADPEVGNAMQDELSRQRRNLELIASENIVSPAVMAAMGSVLTNKYA
EGYPGKRYYGGCQYVDVVEEIARKRACQLFGAEHANVQPHSGAQANIAVYFALLKPGDTV
MGMNLNEGGHLTHGSPVNISGTYFNFVPYGVDSKTGRIDYDKLIEQAQLVKPKMIVGGAS
AYPRIIDFKKFREAADSCGAILMIDMAHIAGLVAAGVHPNPVEYADIVTTTTHKTLRGPR
GGMILCKEKYAKAIDKAIFPGTQGGPLMHIIAGKAVCLGEAMKPSFKEYGKKIVENAQAL
AKGLLDRGVKLVSGGTDNHLLLVDLTGMDLTGKELETRLDSIRITANKNTVPGETRSPFK
TSGLRLGTPAVTTRGMQPKDMDIIASCIADTIRDFDGTKEASLAKVGALCKKYPLYE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggatttgatagacaccattggattcgtcaaaaatgccgaccccgaagttggc
aatgccatgcaggacgagctttcccggcagcgccgcaacctggagctgattgcctctgaa
aatatcgtttctccagcagttatggcagccatgggcagtgttcttaccaataagtacgcg
gaaggttatcccggaaagcggtactacggcggctgccagtatgttgatgtggtagaagaa
attgcccgcaagcgtgcctgccagctttttggcgctgagcatgccaatgtacagccgcat
tccggcgcacaggcaaacattgccgtttattttgcgttgctgaagcccggtgatactgtc
atgggcatgaatcttaatgaaggcggacacctaacacatggttctcctgtcaacatttcc
ggcacttattttaacttcgttccgtatggagtcgattccaaaaccggacgaattgactat
gacaagctaattgaacaggcacagctggtaaagccgaagatgattgtcggcggtgccagt
gcctatccgcgtatcattgactttaaaaaattccgggaagcggcggattcctgcggtgct
atcctgatgattgacatggcacatattgccggactggtcgccgcgggcgtgcatcccaac
ccggtagagtacgccgatattgtcaccactaccacccacaagacactgcgcggcccgcgc
ggcggcatgattctatgcaaagagaaatacgcgaaagccattgacaaggctatcttcccg
ggcacgcagggcggcccactcatgcacatcattgctggcaaggcagtttgcctgggcgag
gctatgaagccttcctttaaggaatatggcaaaaagattgttgaaaacgcacaggcactg
gccaagggccttctggaccgcggcgtcaagctggtttccggcggcacagacaaccacctt
ctgctggtggacctgaccggtatggacctgaccggcaaagagctggaaacccgcctcgat
tccatccgcattaccgcgaataagaacactgtgccgggcgaaacacgcagcccctttaag
acttccggcctgcgtttgggtacgccggccgttaccacacgcggtatgcagccgaaggac
atggatattattgcttcctgcattgcggacaccattcgtgactttgacggcaccaaggaa
gcttctttggccaaagtgggcgccctgtgcaaaaaatacccgctgtacgaataa
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