Ruminococcaceae bacterium CPB6: B6259_04325
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Entry
B6259_04325 CDS
T04880
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B6259_04325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_04325
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
B6259_04325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ARP50172
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Position
873421..875250
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AA seq
609 aa
AA seq
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MPKIHVLEKHVAELIAAGEVVERPASVAKELVENTVDAGATAVTVEIKHGGIPFLRVTDN
GCGMVREDVPLAFLRHATSKVQGKEDLAGIHTLGFRGEALASIAAVSHVELLTRTANDLA
GTRYLISGGDEEGCEDAGCAQGTTFVVRDLFYNTPARMKFLKKDVTEGNAVSGVVDHEAL
AHPEIAFRFLRDGKETLHTPGDNKLKNAIFAVYSREFTQGLLPVRYELNGVKVWGYISKP
VASRPNRSMQNFFFNGRYVRSRTAMVAMEEAFKGSLMVGRFPACVLHIQLAFSAVDVNVH
PSKMEIRFMNERPVFEAVYHGVKTALQKEDTPSILKLQPQPQKPTQVIFPTPVTGQQMHL
QPQRHQMPAVHDSVTFADIPAVPADKVAVPPPIQTTAAVPPANEPTAVESDLAPQTSGDA
EEKPQKLIGEAFGTYILVQQGDDEIRIVDKHAAHERMLYEQLKAQTGDLPQQMLLSPITV
TLSKEEYTAVLEHTELLARAGFDIEDFGPGTVLVRSAPVMLQENISSAVEEMAGYLAENR
TSILTEKLDWLYHNIACRAAVKAGDESTPEELLELVRRLEKEDVRYCPHGRPVSIVLRRK
DLEHQFGRI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaatccatgtccttgaaaaacatgttgccgaactcatcgcggccggagaggta
gttgagcgccccgcttccgtggcaaaggaactggtggaaaatacagtagatgcgggagca
accgctgttacagtggaaattaagcacggcggcattccgttcctgcgtgtcacggataac
ggctgcggcatggtaagggaagatgttccgctggcatttctgcgccatgcaacaagcaaa
gtacagggaaaagaggaccttgccggtatccacacgctgggtttccggggagaagcgctg
gcatcgattgcggcggtttcccatgtggagctgctgacgcgcacagccaatgaccttgcc
ggaacgcgatacttgatttccggcggcgatgaggaaggctgtgaggacgccggctgcgca
cagggaacgacttttgtcgtccgtgacctcttttataatacgccggctcgtatgaaattc
ctaaaaaaagacgtaaccgagggcaatgcagtgtccggtgtggtcgaccatgaagcgctg
gcgcaccccgaaattgcttttcgcttcctgcgggacggaaaagagacgctgcatacgccc
ggtgacaataagctgaagaatgcaatcttcgcggtgtacagccgtgaattcacacagggt
ctgctgccggtccgctatgaattaaacggcgtgaaggtatggggctatatcagcaagcca
gtggcttctcggccgaaccgcagtatgcagaatttcttttttaatggccggtatgttcgt
tcccgaaccgcaatggtcgctatggaggaagcctttaaaggcagtctgatggtggggcgg
tttcctgcctgtgttcttcatatccagttggccttttcagcggtagatgttaacgtgcac
cccagcaaaatggaaattcgctttatgaatgaacgtccggtctttgaggccgtttatcat
ggtgtcaagacagctctgcaaaaagaggacactcccagtattcttaagcttcagccgcag
ccacagaaaccaacacaggtaattttccctacacctgttacaggtcagcagatgcacctg
cagccgcagcgacaccagatgccggcagtgcatgacagtgttacatttgctgatattcct
gcggtgcccgctgataaagtagctgtcccgccgcccatccaaacaacagcggctgttccg
cctgcaaacgaaccgaccgcggtggagtcggaccttgcaccgcagacatcgggggatgca
gaggagaaaccgcagaagctgattggtgaagctttcggcacttatattctagtacagcag
ggggacgacgaaatccgcattgtggataagcatgcggctcatgagcgaatgctgtatgaa
cagctgaaggcacaaactggtgacttgccgcagcaaatgctgctgtcacccattacggta
acactttctaaagaagagtatacagcggtattggagcataccgagcttttggcaagggcc
ggatttgacatagaggactttgggccgggaaccgtgttggtacgcagcgcgccagttatg
ctgcaggaaaacatttcatctgcagtggaagaaatggctggatatctggctgaaaacagg
accagcattttaaccgaaaaactggactggctgtaccacaacattgcctgccgtgcggca
gtgaaagccggagatgagagtacaccggaggaactgctggaacttgttcggcggctggaa
aaagaagatgttcgttactgtccgcacggccgtcccgtctccattgttttgcggcgcaaa
gatttggagcaccagtttggcagaatttga
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