Ruminococcaceae bacterium CPB6: B6259_04925
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Entry
B6259_04925 CDS
T04880
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6259_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_04925
Enzymes [BR:
rbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B6259_04925
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6259_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
ResIII
PriA_C
Zn_ribbon_PriA
DUF815
AAA_16
Zn_Ribbon_TF
HypA
AAA_22
AAA_19
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
ARP50275
LinkDB
All DBs
Position
980510..982969
Genome browser
AA seq
819 aa
AA seq
DB search
MRQMQVVKVAVEKTVYHFDKDFDYAVPDSLTGQAVPGCRVLVPFGAGSRLRQGMILSSAE
ELDSGKKLKYIRAVLDEAPLLSHEMLFLVPWLKQRCFCTLFEAVRLLLPVGLTYQLRRFY
TLAPDVRPAEVQRLLPDEQIVVAQLANHAAVERKKLLKCAGLPPDSNVPDRLCEAGILSC
TRNPVRRMGDAFKKMVRLCAELPQQFRLTPRQKEVFKVLQDVGCASVKEICYFTGVTPVV
IENMEAHGVCETYEQEQYRIPYSKNGIAAGEQTPIHLSPAQETAFTHLYQLSCKGDASAA
LLYGVTGSGKTSVYLCLIDKALEAGRTALLMVPEISLTPQMVRIFRQRYGKKMAVFHSDL
SVGERMDEWKRVRRGEATVVVGTRSAVFAPLDHIGLIVVDEEQESAYQSESSPRYHAKEV
AWFRCRYHHALLLLTSATPSVETYYAAKTGKIDLEILPERYGPAQMPEVHVCDMNAELQN
GNVSILSRPLLEAVQETLCDGQQAILLLNRRGYHTFVVCPDCGHVMTCPNCSISLTYHAA
NHRLMCHYCGYSVPMTMECPACHGTHLQYRGSGTQKAEEELKKLLPQARVLRMDADAAMS
RYAYEDKLHAFANGKYNLMIGTQMVAKGLDFENVTVVGVLNADGSLYNDDFRSSERTFDL
LTQVVGRAGRGRLHGRAYLQTYTPENPVFALAAKQDYPAFYEQELPLRKWMLYPPFADLC
VVGFVGSEEARVRGGSSIFLQMLRKLAASEYGKLPLRVLRPSPARIVRMDGRYRYKLLIK
CRNSLLFRKMIACLLVAFSKRKDTKGVTAFADINPDSIL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
ataaggcaaatgcaggttgtcaaagtcgctgtggaaaaaacagtgtatcattttgataaa
gactttgactatgcagtgccggactctcttaccggccaggcagtgccagggtgccgcgtc
ttggtcccttttggcgcaggcagccgcctgcgccagggcatgattctgtcctccgccgag
gaattggacagcggcaaaaagctgaaatatataagagcggtgctggatgaagcaccgctt
ctttcgcatgaaatgctttttttggtaccgtggctgaaacagcgctgcttttgtacactg
tttgaagcggtacgattgctgctgcctgtaggacttacctaccagctgcgccgtttttat
acactggcaccagacgttcgtccggcagaggtgcagcgccttttgccggacgaacagatt
gtagtcgcacagcttgcaaatcatgcggcagttgaacgaaaaaagctgctgaaatgtgcg
ggcttgccgccggattccaatgtgcccgaccgtttgtgtgaagcgggcattttgtcctgt
acacgcaatccggttcgccgcatgggagacgctttcaagaagatggtacggctgtgtgcc
gagctgccgcaacagtttcgccttacaccgcggcagaaggaagtttttaaggtcttgcag
gacgtcgggtgcgcgtctgtcaaagaaatttgttattttacaggtgttacaccggtcgtt
attgagaacatggaagctcacggcgtttgtgaaacatacgagcaggagcaatatcgcatt
ccatattcgaaaaatggaattgcagcaggtgaacaaacgccgattcatctttcccccgca
caggaaacagcctttacacacctatatcagctttcctgcaaaggagatgcgtcagccgcg
cttttgtacggtgtgacaggcagtgggaaaaccagcgtgtatctctgcctgatagacaaa
gccttagaggcgggccgtacggcactgctaatggtgccggaaatttccctgacaccgcag
atggttcgcatttttcggcagcgttatggaaagaaaatggctgtttttcacagtgacctt
tctgtcggtgaacgtatggacgagtggaaacgtgtgcgcaggggggaagccacggtggtt
gttggcacgcgctctgcggtttttgcgccattagaccatattggacttattgttgtggac
gaagaacaggaatctgcttatcagtcggaaagttccccacgttatcatgcaaaagaagtg
gcgtggtttcggtgccggtaccatcatgcacttttgttgctgacttctgcaacgcccagt
gtagaaacttattatgcggcgaaaacgggaaaaatagatttagagattcttccggaacgc
tatggtccggcacagatgccggaagtacatgtctgtgatatgaatgcagaactgcagaac
ggcaatgtttctattttaagccgcccgcttttggaagctgtgcaggagacactgtgcgat
ggacagcaggccattttgctgctgaatcgccgcgggtatcatacctttgtggtctgtccg
gactgcggtcatgtaatgacgtgccccaactgcagcatttccttgacttaccatgcggcc
aaccatcgtctgatgtgccactactgtggttattctgtccctatgacgatggaatgtccg
gcctgtcacggaacgcatttgcagtatcgcggctccggcacacaaaaagcggaagaagaa
ctgaaaaagcttctgccgcaagcgcgtgttctgcgtatggatgcggatgcagccatgtct
cgttatgcatatgaggacaagctgcatgcctttgcaaacggcaagtacaaccttatgatt
ggaacccaaatggtcgcaaaaggccttgattttgaaaacgtgacggtggtcggtgtactg
aatgcggatggctccctgtacaatgacgattttcgcagttctgagcggacatttgattta
ctgacgcaggttgttggacgagctggccggggccgtctgcacggcagagcgtatctgcag
acctatacaccggaaaatccagtatttgcgctggcagccaaacaggattaccccgctttt
tatgaacaggagctgccgctgcgcaaatggatgctgtatccaccgtttgccgatttgtgt
gtggtcggttttgtcggaagtgaggaagcgcgcgtccgcggcggcagcagtatttttctg
cagatgctgcgaaagctggcggccagtgaatatgggaagctgccgcttcgggtgttgcgt
ccttctccggcacgtattgtccgtatggatgggcggtaccgctataagcttctgataaag
tgccggaacagccttttgttccggaaaatgatcgcatgtttgttggttgccttttccaaa
cggaaagataccaaaggggttaccgcttttgcggacatcaatccggacagcattctgtag
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