Ruminococcaceae bacterium CPB6: B6259_05770
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Entry
B6259_05770 CDS
T04880
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbp03032
]
B6259_05770
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_05770
Enzymes [BR:
rbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B6259_05770
DNA replication proteins [BR:
rbp03032
]
Prokaryotic type
DNA Topoisomerases
B6259_05770
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B6259_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Lar_restr_allev
Toprim_4
ZapG-like
HypA
Auto_anti-p27
PhoU_div
Motif
Other DBs
NCBI-ProteinID:
ARP50430
UniProt:
A0A1W6WDT9
LinkDB
All DBs
Position
complement(1160638..1162782)
Genome browser
AA seq
714 aa
AA seq
DB search
MSKLVIVESPAKAKTIQKYLGDGYTVVASMGHVRDLPKSRLSVKVNDNFKPQYSIIKGKE
KLVEDLKKKAAKSDSVLLATDPDREGEAISWHLAYILGLDVNDTNRVTFNEITHTGIKNG
MENPRTIDMDLVNAQQARRILDRLVGYKLSPFLSQKIRRGLSGGRVQSVAVRIIVDREEE
IKAFKPEEYWSIDGKFVPAKGTSRRQFIASLYGLAGQKGKLKIENKEQADAILDELKDAD
YVVTSIKKGTRRKSPAPPFITSTLQQEASRRLGFTARRTMAAAQELYEGIEIEGMGAVGL
ITYMRTDSLRLSEDAIQAASAYIQERWGDKYLPDKPRHYKAKANAQDGHEAIRPTVPSLD
PEKIKSSLSNDQYKLYKLIWERFLACQMSNCLQATTRAEITAGDKYLFKASGYTVTFDGY
TVLYEERKDDGEKESSGLLPPLEKDMPLRCKEITGNQHFTQPPARYTEASLIKALEENGI
GRPSTYATTISTILNREYVVREGKALKPTELGEVVTKLMKERFPKVVNVKFTAQVENELD
EVQNGKVEWVQAVHDFYDDFAEALKKAKEEMKDVKIHLKEDETDIICEKCGRRMVIKTGR
YGKFIACPGYPECKNIKKYVEKNGAKCPKCGGDVVIKHTKKGRIFYGCENYPKCDFVSWD
EPTEKLCPRCGKTLLRKKGKNPRYYCVTPDCGYEHLGDDFSDEEQQAPEEETKA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagcttgttattgtggagtcacccgcaaaagcaaagaccattcagaaatattta
ggtgatggctatacagtcgtcgcttctatgggacatgtcagggacctgccaaaaagccgc
ctgagtgtcaaagtaaatgataattttaaaccccagtattccattatcaagggtaaagaa
aaactggtggaggacctgaaaaagaaagctgccaaaagcgacagtgtactgctggcaacg
gaccctgaccgcgaaggagaagccatttcgtggcatcttgcttatatcctcggtttggac
gtaaatgacaccaaccgtgttacttttaacgaaattacccacaccggtatcaagaatggt
atggaaaatccgcgtaccattgatatggacttggtcaacgcacagcaggcccgccgcatt
ttggaccggctggtgggatacaaactcagccccttcctgtcccaaaaaatacgccgcggc
ctttctggtggccgtgtgcagagcgtggccgtacgcatcattgtagaccgtgaagaggaa
atcaaagcattcaagccagaagaatattggagcattgacggcaagtttgtcccggcaaag
ggaacgtcccgccggcagttcattgccagcctgtatggccttgccggacaaaaaggcaaa
ttaaaaatcgaaaacaaggaacaagcagacgctatcctcgacgaactgaaagatgcggac
tatgtggttacaagcatcaagaagggtacacgccgcaaaagtccggcaccgccgttcatt
acttctacactgcagcaggaagccagccgccggcttggttttacggcccgccgtaccatg
gcagccgcgcaggaactatacgaaggcattgaaattgagggcatgggggctgttggcctg
attacttatatgcgtacggattctctgcgcctgagtgaggatgcgattcaggcggcctct
gcgtacattcaagagcgctggggggacaagtacctgcccgataagccgcgccactataag
gcaaaggccaatgcacaggacggccatgaagccattcgcccgaccgttcccagccttgac
ccggaaaaaatcaagagcagcctttccaacgaccagtataagctgtacaaacttatttgg
gagcgcttccttgcctgccagatgagcaactgcctgcaggccaccacacgggccgaaatc
actgccggtgacaagtacctgtttaaagcgagcggctataccgtcacctttgatggctat
accgttttgtacgaagagagaaaagatgacggcgaaaaggaaagcagcggtctgctgcct
ccgctggaaaaggatatgccgctgcgctgcaaggaaatcacagggaaccagcactttacc
cagccgccggcgcgctataccgaagcaagcttaatcaaggcgctggaagaaaacggaatt
ggccgtcctagtacctatgctactaccattagtaccattttgaaccgtgaatatgttgtg
cgggaaggcaaggcattgaaacccacagaactgggcgaagtggtcaccaaactgatgaag
gaacgcttccccaaggtggtaaatgttaagtttacggcacaggtggaaaacgaactggat
gaagtgcagaacggcaaagttgaatgggtgcaggccgtacatgatttttatgacgatttt
gctgaggcactgaaaaaagcaaaagaggaaatgaaggatgtcaaaattcatctgaaagag
gatgaaacagacatcatctgtgaaaagtgcggccgccgcatggttatcaaaacgggccgc
tatggaaaatttattgcctgccccggctatccagaatgtaaaaacatcaaaaaatatgta
gagaaaaacggtgccaaatgccccaaatgcggcggtgatgttgtcatcaagcataccaaa
aaaggccgcatcttttatggctgtgaaaactatcccaagtgtgacttcgtttcatgggat
gagccgacagagaaactttgcccgcgctgcggcaaaacactgctgcgtaaaaaaggcaag
aacccgcgctactactgcgtcacgccggactgtggttatgaacatctcggcgacgatttt
tcagatgaagagcagcaggcaccggaagaggaaacaaaagcgtga
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