KEGG   Ruminococcaceae bacterium CPB6: B6259_05955
Entry
B6259_05955       CDS       T04880                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
rbp  Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:rbp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rbp02048]
    B6259_05955
Prokaryotic defense system [BR:rbp02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    B6259_05955
SSDB
Motif
Pfam: Cas_Csd1 Salyut
Other DBs
NCBI-ProteinID: ARP50462
LinkDB
Position
1195368..1197125
AA seq 585 aa
MILQSLVRHYDALAAGNLISPAGWCTAKVSLALRIAPDGTLLNVISLKVPSKNGKKEVPQ
PMQVPEQVKKTSGVAANFLCDNGSYLLGIDDKGKPERTQKCFEAAKELHHAVLDHTESEA
AKAVLHFFDTWDINTAAENEKLTDYLDEIEAGANLVFEMPDGTRVHEDSAVRTAWEQYHT
KIPDDAVRMRCLVTGEEAPIARLHPSIKGINGAQPSGASLVSYNAPAFESYDHTQGLNAP
VSEIAAFKYGTALNYMTADRDHIQHIADTTVLYWTEGTEPLEQDIWNTAVFGSDSKVTEA
DLKGIIDALANGGSTIFQDTVIQYDTPFYVLGLAPNASRLSVRFFLQNKFGRMLQNLMEH
NERLKIIQPMGETHELPLWTLLNETANQNSKNKAPPAPMAAAVLTSILMGTDYPSSLFEN
VMLRIRAEHDINWKKAAIIKAYFLKNKEITIPEEVLKVELNKDSDYMPYVLGRLFAVLEM
VQKTATPGIKATIRNKYFTSASATPSTIFPLLLSLSQHHQRKLSEGSKIYYDKIITELEN
RIHKTLPTRFSLQEQGAFYLGYYHEKQDLFTSKKEKENSKAEEDN
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgattctgcagtcattggtcaggcattatgatgcactggcggccggaaatctcatctcc
cctgccggttggtgtacagcaaaagtttcgctggcgctccggattgcgcctgacggcacc
ctgttaaacgtgatttccctaaaagtaccatctaaaaatgggaaaaaagaagttccgcag
cccatgcaggtaccggaacaagttaaaaagacttctggtgttgccgctaattttttatgt
gacaatggcagctatctgctgggaatagacgacaaaggaaagccagaacgtacccaaaag
tgctttgaagcagcaaaagagctgcatcatgccgtactagaccatacagaaagtgaagcc
gccaaagcagtccttcacttttttgacacatgggatatcaatactgcggcagaaaatgaa
aagctgaccgattatttggacgaaatcgaagccggagcgaatctcgtttttgaaatgccg
gacggcacaagagtgcatgaggactctgctgttcgaacagcgtgggaacagtaccacaca
aaaataccggacgatgcagtacggatgcgctgcctagtcacgggagaagaagcccctatt
gcccggcttcatccaagcattaagggaattaacggtgcgcagccttccggcgcttctttg
gtttcctacaacgcacccgcttttgagtcctatgaccacacgcagggcctaaacgcaccg
gtcagtgaaatagcagcattcaaatacggcactgcgctaaactatatgaccgcggacagg
gaccatatccagcatattgcggatacaacggtcctgtattggaccgaaggcactgaacca
ttggaacaggatatttggaacaccgctgtgtttggctctgacagcaaagttacagaagcg
gacctaaaaggaatcattgatgcactggcaaacggcggcagcacgatctttcaggacacg
gtgattcagtacgatactcccttctatgtccttgggttggcaccgaacgcttcccgcctg
tctgtacggttcttcctgcagaacaagtttggccgtatgctgcaaaaccttatggaacac
aatgagcgcttgaaaatcattcagcccatgggcgaaacgcatgagctgcccctctggacg
ctgctaaatgaaacagcaaatcaaaactccaaaaacaaagcgccgcctgcgcctatggct
gccgctgtgctgacgtctattctaatggggacagactatccttcttccctttttgaaaat
gttatgctgcgcatacgcgcagagcacgacatcaattggaaaaaagccgcgattataaaa
gcctatttcctgaaaaacaaagaaatcacaataccagaggaggtattaaaagtggaactg
aacaaagatagtgactatatgccgtacgttctcgggcggctgttcgccgtactcgaaatg
gtacaaaagacggcaaccccgggtataaaagcaaccattcgtaataaatactttaccagt
gccagcgcaacgccatcaactattttcccgttgctgctgagcctttctcagcaccaccag
cgcaaactttccgaaggttctaaaatctattacgataaaattatcacagagctggaaaac
cgcatccataaaacactgccgacacgtttttctctgcaggaacagggtgccttttacctt
ggctattaccatgaaaagcaggaccttttcacttctaaaaaagagaaagaaaacagcaaa
gctgaggaggataactga

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