Ruminococcaceae bacterium CPB6: B6259_07400
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Entry
B6259_07400 CDS
T04880
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
rbp
Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbp03032
]
B6259_07400
03036 Chromosome and associated proteins [BR:
rbp03036
]
B6259_07400
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_07400
DNA replication proteins [BR:
rbp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B6259_07400
Chromosome and associated proteins [BR:
rbp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B6259_07400
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B6259_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ARP50715
UniProt:
A0A1W6WEQ5
LinkDB
All DBs
Position
complement(1499375..1499650)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELINAVAEKTAVSKKDTENIINAAISSIIETVADEEKVQLAGFGTFECRNRSARQG
RDPRTNTTIEIPASKAPAFKAGKAFKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaacttatcaatgctgttgcagagaaaactgctgtatctaaaaaagat
actgaaaatattatcaatgctgctatcagctccatcatcgaaacagtcgccgacgaagaa
aaggtacagctggcaggcttcggcacttttgagtgccgcaaccgcagcgcacggcagggc
cgtgacccccgcaccaatacgaccattgagattccagcttccaaggcaccggcattcaag
gctggcaaggcatttaaggacgctgtgaataagtaa
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