Ruminococcaceae bacterium CPB6: B6259_08675
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Entry
B6259_08675 CDS
T04880
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B6259_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbp03021
]
B6259_08675
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_08675
Enzymes [BR:
rbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B6259_08675
Transcription machinery [BR:
rbp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B6259_08675
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B6259_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Hpr_kinase_C
I_LWEQ
Motif
Other DBs
NCBI-ProteinID:
ARP50932
UniProt:
A0A1W6WF80
LinkDB
All DBs
Position
complement(1761892..1762845)
Genome browser
AA seq
317 aa
AA seq
DB search
MIEIEKPKIEIADVSDDGNYGKFVVSPLERGFGTTLGNSLRRVLLSSLPGVAPTSIKIDG
VVHEFSTIPGVKEDVTEMVLNIKNLTAKLHCDGPKTVEICAEGPCDVTADSIKCDSEVEI
LNPELHIATLDEGAKLYMEITLDKGRGYVPSDRNKQNMAANVIGVIPVDSIYTPVYKVNF
NVENARVGQRIDYDKLTLEVWTNGVITAQEAVSLAAKFLTEHLNLFVNLSDKGSNAEIMV
EKDDKDKEKVLDMTIEELDLSVRSFNCLKRAGINTVGDLVNKSEEDMMKVRNLGRKSLEE
VIWKMASLGYNLRKDDE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagatagaaaagcccaaaattgaaatagcagacgtatctgatgacggcaattac
ggcaagttcgtggtgtcgccgctggagcgcggctttggtacaaccctgggcaacagcctg
cggcgcgtgctgctttcctctttgccgggcgtggcccctacctctattaaaatagacggt
gtggtacacgagttttccaccattcccggtgtaaaagaggacgtcactgaaatggttctg
aatatcaagaaccttaccgcaaagctgcactgcgacggtcccaagaccgttgaaatctgt
gcggaaggcccctgcgacgtaacagcagattccattaagtgtgacagcgaagtggagatt
ttgaacccagaactgcacatcgccaccctcgacgagggcgcaaagctctacatggaaatt
acgctggacaaaggccgcgggtatgtgccctctgaccgcaacaagcagaacatggctgcc
aatgtcattggcgttattccggttgactctatttacaccccggtgtataaggtgaacttt
aacgtggaaaacgcccgtgtgggccagcgcatcgactacgacaagctgaccctggaggtt
tggaccaacggcgtgattaccgcgcaggaggccgtctctttggcggcaaagttcctcacc
gagcacctcaacctgtttgtcaatctgtctgataaaggcagcaacgcagaaatcatggtg
gaaaaggacgacaaggacaaggaaaaggtcctcgatatgaccattgaagagctggacctt
tctgtccggtctttcaactgcctcaagcgcgccggcattaacaccgtgggcgaccttgtc
aataagtcggaagaggacatgatgaaggtgcgcaaccttggacgtaagtcactggaagaa
gttatctggaagatggcttctcttggatacaatctgcgcaaggacgatgaataa
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