Ruminococcaceae bacterium CPB6: B6259_08925
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Entry
B6259_08925 CDS
T04880
Name
(GenBank) hypothetical protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp00550
Peptidoglycan biosynthesis
rbp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B6259_08925
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbp01002
]
B6259_08925
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
B6259_08925
Enzymes [BR:
rbp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
B6259_08925
Peptidases and inhibitors [BR:
rbp01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
B6259_08925
Peptidoglycan biosynthesis and degradation proteins [BR:
rbp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
B6259_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
RIFIN
Stevor
Motif
Other DBs
NCBI-ProteinID:
ARP50980
UniProt:
A0A1W6WFC2
LinkDB
All DBs
Position
1800409..1801827
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AA seq
472 aa
AA seq
DB search
MKKRLLSLLLLLSVTAAGCLPVYAAGSSTAQPRTASSSSAVASGAVTQSAAQSGDSVFKP
NFTLNSKAAALVNLDTDTNVFEQNANQKMYPASTTKIMTFIITIENVKNVDTATMTYTDK
EKKIIDGTGSSTAGLKVGEKFSIHQLLYAMMVPSGNDAALLLATYVGNGDVSKFVAMMNS
KAKALGCTGTHFVNPNGLHNVNHYTTAHDMALMAKYALNLNYFQEICNTTVYNLTPLNQP
TVKRQLTTTNAMIDRGAQGGLYYNPYVKGIKTGHTSESGRCLVSTAIYGGRTYLCVLMGA
PINEKQYGEMIDTTNLYKWIYSNFNLVQVASSKQPIWEVPLNYAWNRDSITLYPEKDVTA
VLPEGVSANSVEVTPNVNSAVNAPVQKGQIIGTATLTYAKQKLATVRLVSNEDISRSELV
HSASAAKAVFTAPWFVVIFIVILILLAVYIVLAVFYSRRKSDLRKVHKYRRF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgcctgctttcgctgctgcttcttctgtccgtcactgcggcgggctgtctg
ccggtatatgccgccggcagcagcacggcacagccccggacagcaagcagttcttccgct
gttgccagcggcgccgttacccagtctgccgcacaaagcggggacagtgtctttaagcca
aactttacgctcaactccaaggcagccgcactggtcaacctggacaccgacacgaatgtg
tttgaacagaacgctaaccaaaaaatgtacccggcctccacaacgaaaatcatgaccttc
attattacgattgaaaatgtaaaaaatgtggataccgccaccatgacctacaccgataaa
gaaaagaaaatcattgacggcaccggcagctccaccgccggattaaaggttggtgaaaag
ttcagtattcatcagctcctgtatgccatgatggtgccctccggcaacgacgcggcactg
ctgctggcaacctatgtgggtaacggtgacgtcagtaagtttgtggcaatgatgaacagc
aaagccaaggcattgggctgtacaggcacccattttgtaaacccaaatggcctgcacaat
gtcaaccactacaccaccgcgcatgacatggccctcatggccaagtacgccttaaacctt
aactactttcaggaaatctgcaacaccactgtgtacaacctgacaccgctgaatcagccg
accgtcaaacggcagctgaccacaaccaatgccatgattgaccgtggcgcacagggcggg
ctgtactacaacccctatgtcaagggcattaagaccggccacaccagtgaatccggacgc
tgcttggtcagcaccgctatctacggtggccgaacctacctgtgcgtactcatgggtgca
cccatcaatgaaaaacaatatggcgagatgattgatacaacaaatctgtacaaatggatt
tacagcaattttaacctcgtacaggttgcgtcctccaaacagcccatttgggaagtaccg
ctgaactacgcctggaatcgggactctattacgctgtatccagaaaaagatgtaacggcg
gttctgccggaaggtgtaagtgccaacagcgtggaggtcacaccgaatgtcaattccgct
gtcaacgcacccgtgcagaaagggcagattatcggcacggcaacactgacgtacgccaaa
caaaagctggcaaccgtccggctggtttccaatgaagacatcagccgcagtgaactcgtc
cattccgccagtgctgcaaaagctgtttttaccgccccatggttcgttgttattttcatt
gtcattctcattctgctggcagtttatattgtattggcagtcttttacagccgccgaaaa
tccgacctgcgcaaagtacataaatacagacgcttttaa
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