Ruminococcaceae bacterium CPB6: B6259_09630
Help
Entry
B6259_09630 CDS
T04880
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbp03009
]
B6259_09630
Enzymes [BR:
rbp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B6259_09630
Ribosome biogenesis [BR:
rbp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B6259_09630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_15
Met_10
Methyltransf_25
MTS
Methyltransf_4
PCMT
PrmA
N6_N4_Mtase
Methyltransf_11
Methyltransf_12
Methyltransf_32
Ubie_methyltran
UPF0020
Saf-Nte_pilin
Methyltransf_24
SAM_MT
Methyltransf_3
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
ARP51112
UniProt:
A0A1W6WFR8
LinkDB
All DBs
Position
complement(1952278..1953450)
Genome browser
AA seq
390 aa
AA seq
DB search
MLRIRCIKLENKQCPLYRKCGGCQLQNMDYARQLEWKQNRTRKLLGKFGKIEPILGMKNP
YYYRNKVQAAFAQDRRGNIVSGVYQSSTHRVVPVKSCLTEDQTADKIMATVRQLLKSFKL
HPYDERTERGFLRHVLVKRGFQSGQVMVVLVASNSIFPAKKFTAALCQKHPEITTVLLNI
NRHHTSMVLGEQEKVLYGPGYIEDTLCGCRFRISAKSFYQINPVQCEVLYSKAMEYAQLT
GKESVIDAYCGIGTIGMVAAKKAGQVLGIELNRDAVRDAAANARQNGLHNIHFVCADATD
YLTEMTEEGIRPDVVFMDPPRAGSTERFLLSLSELAPQRVVYISCNPETQARDLQYLCEL
GYAVQKIQPVDMFPHTNHVETVVLMSRVRD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaatcaggtgtatcaaattggaaaataaacagtgcccactgtaccgtaaatgc
ggcggctgtcagctgcagaacatggactatgcccggcagctggaatggaaacagaaccgt
acacggaaactgctgggaaagttcgggaagattgagcctattttaggcatgaaaaatccc
tactactaccggaataaagtgcaggcggcttttgcacaggaccgccgcggcaatatcgtt
tccggcgtgtatcaatccagtacgcatcgggtggtgccggtgaagtcctgcctgacagag
gatcaaaccgcggataagattatggcaacggttcgtcagctgttgaaaagctttaagctg
cacccctatgatgagcgtacggaacgcggttttctgcgccatgtattggttaagcgcggt
tttcaaagcggacaggttatggttgtattggttgccagcaattccatttttccggccaaa
aagtttacggcggcgctctgccaaaagcacccggaaattacaacagttctgctgaatatc
aatcgtcaccataccagcatggtgttgggggaacaggaaaaggtcctgtatggaccgggg
tatattgaagatacgctgtgtggctgccgatttcgcatttctgcaaagagtttttaccag
attaaccctgtccagtgtgaagttctgtacagcaaggccatggagtatgcgcaactgacg
ggaaaagaaagcgttatcgatgcctattgtgggattggcaccatcggcatggtagctgcg
aaaaaggccggccaggtactgggcattgagctgaaccgcgatgccgtgcgggatgcggcg
gcaaatgcccggcagaatggactgcacaacattcactttgtgtgtgcggacgcaacggat
tatctgaccgagatgacagaggagggcattcgccccgatgttgtctttatggatccgccc
cgtgccggcagtaccgagcgttttttgctttctctttcggagctggcgccgcagcgagtg
gtttatatttcctgtaatccggaaacgcaggcgcgtgacctgcagtatctttgtgaactc
ggttatgcggtacaaaaaatacagccggtcgatatgttcccgcataccaatcatgttgag
acggtagtattgatgtcaagggtcagggactaa
DBGET
integrated database retrieval system
