Ruminococcaceae bacterium CPB6: B6259_09860
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Entry
B6259_09860 CDS
T04880
Name
(GenBank) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B6259_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_09860
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
B6259_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Spore_YtfJ
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARP51154
UniProt:
A0A1W6WG92
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Position
complement(2000726..2003101)
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AA seq
791 aa
AA seq
DB search
MDQQTKHHFHALELDKILHLLKQETASDAAADMAEQLCPLEDLSSVQRLLQETWDAYGLM
AKFGSPAFGGLHDVANPLRRASSGGVLNMGELLRIAGVLRCLRAVSDWRSKSAGIKTTLD
DRFNCIVTNKYLEEKIYGAIATEEEMNDNASPALAAIRRKIRAASTRAREKLDKMVHSPY
YQKFLQDPIVTQRSGRYVVPVKAEFRGEVSGLVHDSSSSGATVFVEPMAVVEANNEVRVL
QNDEKNEIDRILQELSAEAGSFADSIIHSCQYAAELDLIFAKASLGYKMKATLPEMNDCG
ELDLKHARHPLIDPKKVVATDIRLGTDFDTLVITGPNTGGKTVTLKTIGLLTLMAECGLL
VPVSDGSRLSVFDRVLADIGDEQSIEQNLSTFSAHMTNIIRIMQEADGKSLVLLDELGAG
TDPVEGAALATSILEQLRQQGARIAATTHYAELKAYALDTPGVQNGSCEFDVATLQPTYR
LLIGVPGRSNAFAISRRLGMKASVVENAQQLVSQENTRFEDVVSKLEESRRSLEDERAEV
QRDLLEAKKALESAEKEKAELEENAQKEMDRAREQASLLVSRTRGQSDLLLNELEELKKQ
KNKQITAEQKAKLNADLRKMEETADPVQKRRRRGGQLPRPLRVGDTVRLVDLDRPASVVE
VSADGKHVVVQAGVIKTKTDVENLQLVSDAEKRKAERRRTRTVSHRFSSAAAPSELDLRG
QTADEAIANVDLFLDHAARSNLTQVTIIHGKGTGVLRKAVQEHLKRHPNVKRYRLGTYGE
GESGVTIAELK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacagacgaaacaccactttcatgcgttggaattggacaagattctgcatctg
ttgaagcaggaaaccgccagcgacgcggcggcagatatggcggagcagctgtgcccgctg
gaggacctttccagtgtgcagcgcctgctgcaggaaacatgggatgcgtacggactgatg
gcaaagttcggttcaccggctttcggcggactgcacgatgtggccaatccgctgcgccgc
gcctcctccggcggtgtgctgaacatgggggaattgctgcgcatagcgggcgttctgcgc
tgcctgcgtgccgtgagtgactggcgcagcaaaagcgcaggaatcaaaacgacactggat
gaccgctttaactgcattgttaccaataaatatttggaagaaaaaatttacggtgccatt
gcgaccgaagaagaaatgaacgacaatgcttcaccggcattggccgccattcgccgcaaa
atccgcgcggcaagcacccgtgcccgtgaaaaactggacaaaatggtccactcgccatat
tatcagaagtttttgcaggacccaatcgttacccagcgttctggccggtatgttgtgccg
gtgaaggcggagttccgcggtgaagtgtccgggctggtgcatgattcatccagcagcggt
gccaccgtatttgtggagccaatggcggttgtggaagccaacaatgaagtgcgtgtcctg
caaaacgacgaaaagaacgaaattgaccgcattttgcaggaactttcggcggaagccggc
tcttttgcggacagcatcattcacagctgccagtatgccgcggagctggacctgattttt
gcgaaagccagcctcggctataagatgaaagcaacactgccggagatgaacgactgcggg
gaattggatctgaagcacgcccgccatccgctgattgatcccaaaaaggtggttgctacg
gacatacggctcggcacagattttgatacattggttattactggtcccaataccggcggc
aaaaccgttacgctgaaaaccatcggtctgctgacgcttatggcagagtgtggcttgctg
gtgccggtttcggacggcagcagactttcagtttttgaccgtgtattggcggacatcggc
gatgaacagtctattgaacagaacctgtccacattttccgcgcatatgaccaatattatc
cgcattatgcaggaggcagacgggaaaagtttggtgctgctggacgaactgggcgccggc
acggacccggtagagggtgcggcactggcgacctctattttggaacaactgcgacagcag
ggtgcccgcattgccgcgacaacgcattatgcggagctgaaagcgtatgcgctggatacc
cccggggtacagaatggctcctgcgagtttgacgtggcgacactgcagccaacctatcgg
ttgctgattggcgtgccgggacgcagcaacgcgtttgccatttcccgccgcttagggatg
aaagcgtccgttgtggagaatgcgcagcagctggtttcgcaggaaaacacccgttttgag
gatgttgtcagcaagctggaggaatcccgccgttcactggaagatgagcgggcagaggta
cagcgtgacctgctggaggcaaagaaggcactggaaagcgccgaaaaagaaaaagcggag
ctggaagaaaacgcacagaaggaaatggaccgtgcccgtgaacaggccagccttctggtt
tcccgcacgcgcggacagtcagaccttctcctcaatgagctggaagaactgaagaaacag
aagaacaaacaaattaccgcagaacagaaggcaaagctgaacgcggatttacgcaaaatg
gaagaaaccgcggacccggtgcagaagcgccgccgccgtggcggtcagctgccgcggccg
ctgcgggtaggtgacacagtacggttggtggatttagaccgtccggcatctgtggtggag
gtttctgcggatggcaagcatgtggtggtacaggccggtgtcatcaagaccaaaacagat
gtggaaaatttgcagctggtcagcgacgcggaaaagcggaaggcggaacgccgccgcacc
cgtacggtatcccatcgcttttccagcgcagcggcgccttcagagcttgacttgcgtggg
caaacggcggacgaggccattgccaatgtggacctgtttctggaccacgccgcccgcagc
aatttgacacaggtcacgattatccatggcaaagggacaggtgtcctgcgcaaagcggtg
caggagcatctgaaacgtcaccccaatgtaaaacgctatcggctgggtacttacggcgag
ggcgaaagcggtgtaaccattgccgaactgaaataa
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