Ruminococcaceae bacterium CPB6: B6259_09865
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Entry
B6259_09865 CDS
T04880
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6259_09865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_09865
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B6259_09865
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B6259_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
ARP51155
LinkDB
All DBs
Position
complement(2003166..2003930)
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AA seq
254 aa
AA seq
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MRVQTQGVVIRVSNVGERDRLVTVLTRDRGVVRAFARNSRAAKSSLVSATQLFCYARILL
FCGKDKYIIDDAQPLEVFFELRQDIGRLSLAQYFCELAGELAPQEDSEKAADFLRLLLCA
FRRLCRGGRPLPVVKAATEMRMLSLAGYMPDLIGCAQCRKYEDSIMYFYPLQGELLCPSC
RQKNGRQDGIALHKGALTALRHTVYADLPKLFSFTLGEQGQQELARASEEYLLDRIEYHF
RTLDFYHTVVQPPA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtacagacacagggagttgtcatccgggtctccaatgtaggggagcgtgaccgt
ctggtaacggtcctgacgcgcgaccgcggggtcgtgcgcgcctttgcacgcaacagccgc
gcggcaaaaagcagcctggtttcggccactcagcttttctgctatgcgcggattttgcta
ttctgcggaaaagataaatatatcatagatgacgcccagccgctggaagttttttttgag
ctgcggcaggatatcggccgtctttcgttggcacagtatttttgcgaactagcgggagag
ctggctccgcaggaggacagcgaaaaagcggcggattttctgcggctgctgctgtgtgcg
ttccggcggctgtgccgcggcggacggccgctgccggttgtaaaggccgccaccgagatg
cgtatgctgagcctggcgggctatatgccggaccttatcggctgtgcccagtgccggaag
tatgaggacagcatcatgtacttttacccgctgcagggcgaactgctgtgccccagctgc
cggcagaaaaacggacggcaggacgggatagccctgcacaaaggggcactgaccgctctg
cgccacaccgtgtatgccgaccttccgaaactcttttcgtttacattgggggagcagggg
cagcaggagctggcgcgcgccagtgaggaatacctattggatcggattgaatatcacttc
cgtacattggacttttaccataccgtggtgcagcctcccgcgtaa
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