Ruminococcaceae bacterium CPB6: B6259_10025
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Entry
B6259_10025 CDS
T04880
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbp03016
]
B6259_10025
Enzymes [BR:
rbp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B6259_10025
Transfer RNA biogenesis [BR:
rbp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B6259_10025
Prokaryotic type
B6259_10025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
SF3b1
Motif
Other DBs
NCBI-ProteinID:
ARP51184
UniProt:
A0A1W6WGD0
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All DBs
Position
complement(2033055..2033993)
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AA seq
312 aa
AA seq
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MTGVLVLDKPEGFTSFDAVAVLRGLTGERKIGHTGTLDPMATGVLPMLLGKATRALPFLA
ERPKEYEASFAFGTATDTLDCTGTVQSRDDTPISRESLLAVLPRFTGEILQTPPMYSALR
HNGVRLYDLARQGKTVERPPRRVTIYRLELLSYRETDRTGTLRVRCSGGTYVRTLCADIG
EALGSHGMMTALRRTAAAGFTLDDAVSLTQAKAMGRERLLQKVLPVEHLFADLPQVTVTM
PQAKRFANGGGLSLDRLHLPEGLCGNCRVRDPEGNFLGLGAEEKGKGQLCVVRLFCTQED
VQNENLPRTDTL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagtgctggtgttggacaaaccggaaggctttacctcttttgacgcagtagca
gtactgcggggccttaccggtgaacgaaaaattggtcatactggtacactggaccccatg
gcaaccggtgtgctgcccatgctgctgggaaaggcgacaagagcgctgccttttttggcc
gaacggcccaaagaatatgaagcgtccttcgcgtttggtacggcgacagatacgctggac
tgcaccggaacggtgcagtcgcgggatgatacacctatttcccgggaaagcctgctggcg
gttctgccgcgctttactggggagattctgcagacaccacctatgtacagcgcgctgcgg
cataacggcgtgcgtctgtacgatttggcccggcagggaaagaccgtggagcgcccgcca
cgccgtgtgactatttaccggctagaactgctttcttatagggaaacagaccgtaccgga
acactgcgggtgaggtgttccggtggtacttatgtgcgcacactgtgtgcggatataggg
gaagcacttggctcacacggaatgatgacagccctgcgccggacggctgcggcaggcttt
acattggacgatgccgtttcactgacacaggcgaaagctatgggacgggaacggctcctg
cagaaggttctgccggtggagcatttgtttgcggacctgccgcaggtgacagtgaccatg
ccgcaggcgaaacgctttgcaaacggcggcggactgtcgctggaccgtctgcacctgcca
gagggactttgcgggaactgtcgtgtgagggaccctgaggggaatttcctcggccttggc
gcagaagagaaggggaagggccagctttgtgttgtgcgccttttctgcacacaggaggat
gtacaaaatgaaaatctaccaagaactgataccctgtga
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