KEGG   Rhizobium binae: J2J99_00030
Entry
J2J99_00030       CDS       T07180                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rbq  Rhizobium binae
Pathway
rbq03030  DNA replication
rbq03430  Mismatch repair
rbq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J2J99_00030 (dnaQ)
   03430 Mismatch repair
    J2J99_00030 (dnaQ)
   03440 Homologous recombination
    J2J99_00030 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbq03032]
    J2J99_00030 (dnaQ)
   03400 DNA repair and recombination proteins [BR:rbq03400]
    J2J99_00030 (dnaQ)
Enzymes [BR:rbq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J2J99_00030 (dnaQ)
DNA replication proteins [BR:rbq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J2J99_00030 (dnaQ)
DNA repair and recombination proteins [BR:rbq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J2J99_00030 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QSY82265
LinkDB
Position
3379..4104
AA seq 241 aa
MREIIFDTETTGLDNRMDRIIEIGGIELFNHFPTGNTLHIYINPGDQKVHPDALAVHGIT
DEFLKDKKAFAEVAEEILAFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVVDTLS
MARRKHPMGPNSLDALCRRYGVDNSHRAKHGALLDSELLAEVYIEMIGGRQAALGLGLSG
QSGQAARGDMVLDDDGVISAVLERPRPLAPRLSQAEAQAHAALVAKLGEKGIWSKFASPP
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtgagatcattttcgatacggaaaccaccggcctcgacaaccggatggaccgcatc
atcgaaatcggcggcattgagctcttcaatcatttcccgaccggcaacacccttcatatc
tacatcaatccgggagatcagaaggtccatccggatgcgctcgccgtgcatggcattacc
gacgaattcctgaaggacaagaaagccttcgccgaagtcgcagaagaaatccttgccttc
ttcggcgatgcgaagtggatcgcccataacgccaccttcgacatgggcttcatcaacgcc
gaattcgcgcgaatcggcttgccgccgatcctgccggaacgggtggtcgacacgctgtcc
atggcgcggcgcaaacatccgatgggaccgaattcgctcgacgcgctttgccggcgttac
ggcgtcgacaattcacaccgcgccaaacacggcgcgcttctcgactccgagctgctggcc
gaagtctatatcgaaatgattggcggcaggcaggcggcccttggcctcggcctatcgggt
caatccggccaggcggcgcgcggcgacatggtgctggatgatgatggggtgatatcagcg
gtgcttgagcggccacgtccgcttgcgccccgcctcagccaggccgaagcgcaggcgcat
gcggcactggtcgccaagctcggcgaaaaaggcatctggtcgaaattcgccagcccgcct
gcgtga

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