Rhizobium binae: J2J99_00945
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Entry
J2J99_00945 CDS
T07180
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rbq
Rhizobium binae
Pathway
rbq03030
DNA replication
rbq03410
Base excision repair
rbq03420
Nucleotide excision repair
rbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J2J99_00945 (polA)
03410 Base excision repair
J2J99_00945 (polA)
03420 Nucleotide excision repair
J2J99_00945 (polA)
03440 Homologous recombination
J2J99_00945 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbq03032
]
J2J99_00945 (polA)
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_00945 (polA)
Enzymes [BR:
rbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J2J99_00945 (polA)
DNA replication proteins [BR:
rbq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J2J99_00945 (polA)
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J2J99_00945 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2J99_00945 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QSY84293
LinkDB
All DBs
Position
205971..208970
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEATGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVVEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
EMARLSRELVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAS
AIEPAVVRIEWGDAAHGPDLDAAEPAPVAGGIPDVSGQAVPVPPRAKAKAAVEGAFSPAD
LAKARAEAFAALPFDHSAYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGF
SMAIADNVADPTGTKIRAAYVPLGHKNGVGDLLGGGLAENQVPMRDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGIETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGRANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEAGLAERVRMLLQVHDELIFEVEDEDV
DKAMPIIVSVMENATMPALEMRVPLRVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttccttgtcgacggttccggattcatctttcgggcgttt
catgcattgccgccgctgacgcgcaagacggacggcctgccggtcggcgccgtatccggc
ttctgcaacatgctgtggaagctcttgagagatgcgcgcaataccgatgtcggggtgacg
ccgacgcatcttgccgtcatcttcgattattccgccaagacattccgcaaggatctctac
gacgcctacaaggcgaaccgttcggctccgcccgaagagctcattccgcaattcgggctc
atccgcgaggcaacccgtgccttcaatctgccctgcatcgaaacggaaggcttcgaggcc
gacgacattatcgccacctatgcccgccaggccgaggcaacgggggccgatgtcaccatc
gtctcctccgacaaggacctgatgcagctcgtcacgccgaatgtccacatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcgtcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgactccgtcgacaacgtgcccggcattccc
ggcatcggcccgaaaaccgccgcccagctgctggaggagtacggcgatctcgacacgctg
ctcgaacgcgccaccgagatcaagcaggtcaaacgccgcgagacgattcttgccaatatc
gagatggcgaggctttcgcgcgaactggtgcggctgcgcaccgacgtgccgctcgatctc
gatctcgacgcgctggtgctggagccgcaaaacggtccgaagctgatcggttttctcaag
acaatggaattcacgacgctgacgcgtcgcgtcgccgaagtttgcgattgcgatgcgagc
gccatcgaaccggcggtcgtccgcatcgaatggggtgatgccgcccatggtcccgatctc
gatgcggccgagccggcgccggtcgccggcggcatccctgatgtctcggggcaagcggtg
cccgtgccgccgcgtgcgaaggcaaaggccgcggtcgaaggcgccttttcaccggccgat
cttgccaaggcgcgcgccgaggcctttgcggcgctgcccttcgatcattccgcctatgtg
acgatccgtgatctggcgacgctcgaccgatggatcgccgatgcgcgcgacaccggcctc
gtggccttcgataccgagaccacgtcgcttgatgcgatgcaggccgagctcgtcggcttc
tcgatggcgattgccgacaatgtcgccgatcccaccggcacgaagatccgcgccgcctat
gtgccgctcggccacaagaatggcgtcggcgatctgctcggcggcggcctggccgaaaac
caggtccccatgcgcgatgccctgccgcggctgaaggcgctgctggaggacgaatcggtt
ctcaaggtcgcccagaacctgaaatacgattatctcttgatgaagcgctacggcatcgag
acgaagagtttcgacgacacgatgctgatctcctatgtgctcgacgccggcaccggcgcc
catggcatggatccgctgtcggaaaaatttctcggccacacgccgatcccgtacaaggat
gtggccggcagcggcagggcgaacgttaccttcgatctggtcgatatcgatcgcgccacc
cattatgccgccgaagatgcggatgtgacgctgcgcctctggctggtgctgaaaccgcgg
ctggcggcagccgggctgaccagcgtctatgaacggctggagcggccgctgctgccggtt
ctggcgcgcatggaagcgcgggggatcaccgtcgatcgacagatcctgtcgcgtctctcc
ggcgaactggcccagggtgcggcgcggttggaggatgagatctacacgctggccggcgag
cgtttcaatatcggctcgccgaagcagctcggcgatatcctgttcggcaagatgggtctt
gccggcggcagcaagacgaagaccgggcaatggtcgacctccgcctcggtgctcgaggat
ctcgccgccgccgggttcgaactgccgcgcaagatcgtcgactggcgccagctcaccaag
ctgaaatccacctacaccgacgcgcttcccggctatgtgcatccggagaccaaacgggtc
cacacctcctactcgctggcttcgacgacgacgggtcgcctgtcttcctcggagccgaac
ctgcagaacattccggtgcgcaccgccgaaggccgcaagatccgcactgccttcatctcg
acgccgggccacaagctgatttctgccgattacagccagatcgaactgcgcgtgcttgcc
catgtggccgagatcccgcagctgacaaaggccttcgaggatggcgtcgacatccatgcc
atgaccgcctcggaaatgttcggcgtgcccgtcgaaggcatgccgagcgaagtgcgccgt
cgcgccaaggcgatcaatttcggcatcatctacggcatctccgccttcggccttgccaat
cagctttcgatcgagcggtcggaagccggcgactatatcaagaaatatttcgagcgcttc
cccggcatccgcgactatatggaaagccgcaaggcgatggcgcgcgacaaggggtatgtc
gagacgatcttcggccggcgcatcaactaccccgaaatccgctcgtccaatccgtccgtg
cgcgccttcaacgagcgggcagcgatcaacgcgccgatccagggttcggcggccgacgtc
atccgtcgggcaatgatcaagatggagccggcgctggctgaagccggtcttgccgagcgt
gtgcgcatgctcttgcaggtgcacgacgagctcatcttcgaagtcgaggatgaggatgtc
gacaaggcgatgccgatcatcgtctcggtcatggaaaatgccaccatgccggcgctcgaa
atgcgcgtgccgctgcgcgtcgacgcccgcgccgccaccaattgggacgaggcgcattga
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