Rhizobium binae: J2J99_03880
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Entry
J2J99_03880 CDS
T07180
Name
(GenBank) rhizobiocin
KO
K01406
serralysin [EC:
3.4.24.40
]
Organism
rbq
Rhizobium binae
Pathway
rbq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
J2J99_03880
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbq01002
]
J2J99_03880
Enzymes [BR:
rbq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.40 serralysin
J2J99_03880
Peptidases and inhibitors [BR:
rbq01002
]
Metallo peptidases
Family M10
J2J99_03880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Peptidase_M10_C
Reprolysin_5
Peptidase_M10
Peptidase_M43
DUF4953
Motif
Other DBs
NCBI-ProteinID:
QSY82969
LinkDB
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Position
798296..802951
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AA seq
1551 aa
AA seq
DB search
MTDLITSTKSVISTGDQKVDGLFSGTAWDGTITYAFPTSASSYGYDYEKYFSFSSISSQQ
KSHALFFMEQSYGSAANDGFSVEGFTNANFEAGSVDTATVRFAQSWLPPTAWAYTPDAGE
PAGDVWFGTDYAGTEDDLRFPTFGNYAGHTLAHELGHALGLKHAHESDVTNPTVVPNAYD
SLEYTIMTYHTYVGDSLSGYKYEHDGAPQTFMMLDIAALQEMYGADYTTNSGDTVYKWNP
NQGITYVNGVAAITPAANRIFATIWDGGGIDTYDLSAYTTALKIDLRAGGYSVFSQDQLA
DLGGGPNYGYARGNIFNALLYHDNVASLIENVQAGSGDDTIVGNEANNTLWGNAGNDSLS
GGSGTDTLIGGTGNDTYTVDNVADVVTEGVDAGTDLIRTTVSSYALTNIANVENLTFIGS
GDFSGTGNSLANTITGGSGNDTLDGGAGSDWLWGGAGNDLLNGGAGNDTMLGGAGNDIFV
VGDSFDFAFENANQGTDTVQTALASYWLSDNVENLTYTGSDSFTGTGNGLANTITGGAGN
DALDGGAGADTLIGGTGNDTYIVDNAGDVVTEHSDEGIDTVRTALASYTLGSDVENLSFV
GEGIFVGTGNSLANTIRGWTGADTLDGKAGADILIGWAGNDIYIVDNAGDVITEGLNEGT
DLIKTGLFSYALTNIANVENLTFTGSGDFSGTGNSLANTITGGAGNDTLDGGAGNDTLVG
GAGNDVYLVDSASDVINEAVSAGTDEIRTALAAYSIAALVNVENLTYTGSDSFTGTGNGL
ANTITGGAGNDALDGGAGADTLIGGTGNDTYIVDNAGDVVTEHSDEGIDTVRTALASYTL
GSDVENLSFVGEGIFVGTGNSLANTIRGWTGADTLDGKAGADILIGWAGNDIYIVDNAGD
VITEGLNEGTDLIKTGLFSYALTNIANVENLTFTGSGDFSGTGNSLANTITGGAGNDTLD
GGGGTDTLVGGAGNDVYLVDSASDVINEAVSAGTDEIRTALAAYSIAALVNVENLTYTGS
DSFTGTGNGLANTITGGAGNDALDGGAGADTLIGGTGNDTYIVDNAGDVVTEHSDEGIDT
VRTALASYTLGSDVENLSFVGEGIFVGTGNSLANTIRGWTGADTLDGKAGADILIGWAGN
DIYIVDNAGDVITEGLNEGTDLIKTGLFSYALTNIANVENLTFTGSGDFSGTGNSLANTI
TGGAGNDTLDGGGGTDTLVGGAGNDVYLVDSASDVINEAVSAGTDEIRTALAAYSIAALV
NVENLTYTGSDSFTGTGNGLANTITGGAGNDALDGGAGADTLIGGTGNDTYIVDNAGDVV
TEHSDEGIDTVRTALASYTLGSDVENLSFVGEGIFVGTGNSLANTIRGWTGADTLDGKAG
ADILIGWAGNDIYIVDNAGDVITENSDEGIDTVRTNLAAYTLGSNVENLTFIGTGAFAGT
GNALSNVIVGGNGSNTLTGGAGNDTLSGGAATDVFVYSPNWGQDTITNFVATGSAHDVIS
IDHNIFVDWESLFAATEQSGNDTIIEADSDNTITLKDVALSSLQSWDFLFA
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccttattacttcgacgaagagcgtcatttcgactggggatcagaaagttgac
gggctcttcagcggcactgcctgggacgggacgataacctatgcgtttcccacgagcgcg
tcatcgtatggctatgattacgaaaaatacttttctttctcttcaatttcgtcccagcag
aagtctcacgctttgttctttatggagcagtcctatgggagtgcggcaaatgacggcttc
tcggtagagggattcacaaacgccaattttgaggccggaagcgtggataccgcaacagtg
cggtttgctcaatcgtggctacctccgacggcatgggcctatactccagatgcaggcgag
ccggcgggcgatgtctggttcggcacagactatgctggcaccgaagatgatcttcgcttc
ccgacattcggcaactatgccggccataccttggcgcacgagcttggtcacgctctcgga
ctgaaacatgctcatgaatcggatgttaccaatccgacggtcgttccgaacgcctacgac
tcgctcgaatatacgatcatgacctaccacacgtatgtcggggacagtttgagtgggtac
aagtatgagcatgatggcgcgccgcaaaccttcatgatgctcgatatcgccgcgctgcag
gaaatgtacggtgcggactacactacgaacagtggcgataccgtctacaagtggaatccg
aaccagggcatcacctatgtcaacggcgtcgcagccatcacacccgctgccaaccgcatc
ttcgcaacaatctgggacggcggcggtatcgacacctatgatttgagcgcttatacgacc
gccctcaagatcgacttgcgagcaggggggtactcggtcttttcccaggaccaattggcc
gacctgggaggaggtccgaactatggttatgcccgcggcaacattttcaacgctcttctt
tatcacgacaatgttgcgtcgttgatcgagaatgttcaggccggctccggcgacgatacg
attgtcggcaacgaggcgaacaatacgctctggggcaatgccggcaatgattcgctttcc
ggcggctccggtaccgacacattgatcggcggaacgggcaacgacacctatactgtcgat
aacgtggccgacgtggtcaccgaaggggtggatgcagggaccgatctgatcaggacgacg
gtttcttcctatgctttgaccaatatcgccaacgtcgaaaacctgaccttcatcgggagc
ggagattttagcgggactggaaacagccttgccaacaccatcaccggcggctccggcaac
gacacgttggacggcggcgccggcagtgactggctttggggcggcgccggcaacgatctt
ctgaacggcggcgccggcaatgacacgatgttaggcggtgccggcaacgatatctttgtt
gttggcgatagtttcgattttgcgttcgagaatgcgaaccaggggacggacacggtccag
acggcgcttgcaagctattggctcagcgacaatgtcgagaatctgacctatacgggatcg
gatagctttaccggcactggcaatgggctcgccaacacgatcactggcggcgcgggcaat
gatgcgctggatggtggggccggtgctgacacgttgatcggcgggacgggcaacgacacc
tatattgtcgacaatgccggagacgtcgtcaccgagcacagcgacgaggggatcgacacg
gttcgtacggctttggcaagctatacgcttggcagcgatgtcgagaacctgagctttgtc
ggcgaggggatttttgtcgggacaggcaatagcctcgccaacacgatccggggttggaca
ggtgccgacaccctggacggcaaggccggagcagacatactgatcggctgggcgggcaac
gacatctatattgtcgacaatgccggggatgtgatcaccgaagggctgaatgaaggaacc
gatctaatcaagacggggcttttttcctatgctctgaccaatattgccaatgtcgaaaac
ctgaccttcaccgggagcggagattttagcgggactggaaacagccttgccaacaccatc
accggcggcgctggcaacgacacgcttgacggcggcgctggcaacgacacgctggtaggc
ggtgccggcaacgacgtctatttggtcgacagtgcgagcgacgtgatcaacgaggcggtc
agcgccggcaccgacgaaatccgtacggcgcttgcagcctactcgatcgccgcattggtc
aatgtcgagaatctgacctatacgggatcggatagctttaccggcactggcaatgggctc
gccaacacgatcactggcggcgcgggcaatgatgcgctggatggtggggccggtgctgac
acgttgatcggcgggacgggcaacgacacctatattgtcgacaatgccggagacgtcgtc
accgagcacagcgacgaggggatcgacacggttcgtacggctttggcaagctatacgctt
ggcagcgatgtcgagaacctgagctttgtcggcgaggggatttttgtcgggacaggcaat
agcctcgccaacacgatccggggttggacaggtgccgacaccctggacggcaaggccgga
gcagacatactgatcggctgggcgggcaacgacatctatattgtcgacaatgccggggat
gtgatcaccgaagggctgaatgaaggaaccgatctaatcaagacggggcttttttcctat
gctctgaccaatattgccaatgtcgaaaacctgaccttcaccgggagcggagattttagc
gggactggaaacagccttgccaacaccatcaccggcggcgctggcaacgacacgcttgac
ggcggcggcggcaccgacacgctggtaggcggtgccggcaacgacgtctatttggtcgac
agtgcgagcgacgtgatcaacgaggcggtcagcgccggcaccgacgaaatccgtacggcg
cttgcagcctactcgatcgccgcattggtcaatgtcgagaatctgacctatacgggatcg
gatagctttaccggcactggcaatgggctcgccaacacgatcactggcggcgcgggcaat
gatgcgctggatggtggggccggtgctgacacgttgatcggcgggacgggcaacgacacc
tatattgtcgacaatgccggagacgtcgtcaccgagcacagcgacgaggggatcgacacg
gttcgtacggctttggcaagctatacgcttggcagcgatgtcgagaacctgagctttgtc
ggcgaggggatttttgtcgggacaggcaatagcctcgccaacacgatccggggttggaca
ggtgccgacaccctggacggcaaggccggagcagacatactgatcggctgggcgggcaac
gacatctatattgtcgacaatgccggggatgtgatcaccgaagggctgaatgaaggaacc
gatctaatcaagacggggcttttttcctatgctctgaccaatattgccaatgtcgaaaac
ctgaccttcaccgggagcggagattttagcgggactggaaacagccttgccaacaccatc
accggcggcgctggcaacgacacgcttgacggcggcggcggcaccgacacgctggtaggc
ggtgccggcaacgacgtctatttggtcgacagtgcgagcgacgtgatcaacgaggcggtc
agcgccggcaccgacgaaatccgtacggcgcttgcagcctactcgatcgccgcattggtc
aatgtcgagaatctgacctatacgggatcggatagctttaccggcactggcaatgggctc
gccaacacgatcactggcggcgcgggcaatgatgcgctggatggtggggccggtgctgac
acgttgatcggcgggacgggcaacgacacctatattgtcgacaatgccggagacgtcgtc
accgagcacagcgacgaggggatcgacacggttcgtacggctttggcaagctatacgctt
ggcagcgatgtcgagaacctgagctttgtcggcgaggggatttttgtcgggacaggcaat
agcctcgccaacacgatccggggttggacaggtgccgacaccctggacggcaaggccgga
gcagacatactgatcggctgggcgggcaacgacatctatattgtcgacaatgccggggat
gtgatcaccgagaatagcgacgaggggatcgacacggttcggacgaacctggccgcctac
acattggggtctaatgtcgagaacctgacatttatcggaacaggggcgtttgccggaaca
gggaacgcgctgagcaacgttatcgtaggcggcaacggttctaatacactgaccggtggc
gccggcaacgataccctcagtggtggagctgcaaccgacgtgttcgtttattcgccgaat
tggggccaggatacaatcacaaacttcgtggcaactggctccgcacatgatgtgatttcg
atcgatcacaacattttcgtcgactgggaatcgctttttgctgcaaccgagcagtcgggg
aatgatacaataatcgaggccgactccgacaacaccataacgttaaaggatgtcgctctt
tcaagcctgcagtcgtgggacttcttgtttgcgtga
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integrated database retrieval system