Rhizobium binae: J2J99_08885
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Entry
J2J99_08885 CDS
T07180
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rbq
Rhizobium binae
Pathway
rbq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2J99_08885 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbq03400
]
J2J99_08885 (xth)
Enzymes [BR:
rbq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J2J99_08885 (xth)
DNA repair and recombination proteins [BR:
rbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J2J99_08885 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
QSY83889
LinkDB
All DBs
Position
complement(1833077..1833868)
Genome browser
AA seq
263 aa
AA seq
DB search
MKIATYNVNGINGRLDILLRWLKEDAPDVACLQELKTDDGSFPRKAIERAGYGAVWHGQR
SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYVEAAVDGMLIGCLYLPNGNPFPSAKFEY
KLRWFRRLHAYAASLLEIEVPSILAGDFNVMPTEIDVYKPERWRDDALFRPEVRKAYARL
VAQGWTDAVRHLHPGERIYTFWKYWRHSFERDAGLRIDHLLLSPTVAPWLRSAAVRRNPR
GWEHTSDHAPVVIELDVPGAEAV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcaacctataacgtcaacggaatcaatgggcgcctggacattctgctgcgc
tggctgaaagaggatgcccctgatgtcgcatgccttcaggagctgaagaccgatgacggc
agctttccgcgaaaggcgatcgaacgggccggctacggcgccgtctggcacggacagaga
tcctggaacggggtcgccatactggcaaagggcaagacgccgatcctgacccggcgcggt
ctgcccggcgatcccgatgacacccacagccgctatgtcgaagctgccgtcgatggcatg
ctgatcggatgcctgtatctgccgaacggcaatccctttcccagcgccaagttcgagtac
aagcttcgctggttccgccgcctgcacgcctacgccgcctcactcctcgagatcgaggtg
ccgtcgatcctggccggtgatttcaacgtcatgccgacggagatcgacgtctacaagccg
gaacgctggcgagacgacgcgcttttccggccggaagtgcgcaaggcctatgctcgactc
gtggcccagggctggacggatgccgtcaggcatctgcatccgggagagcgcatctacacc
ttctggaaatactggcggcacagtttcgagcgcgacgccgggctgcggatcgaccacctg
ctgctcagcccgacggttgctccgtggcttcgatcggcagccgtccggcgaaatccacgc
ggctgggagcataccagcgaccatgcgcccgtcgtgatcgaactcgacgttcccggagct
gaagccgtgtaa
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